2qm3: Difference between revisions

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-[[Image:2qm3.jpg|left|200px]]
- {{Structure
+==Crystal structure of a predicted methyltransferase from Pyrococcus furiosus==
-|PDB= 2qm3 |SIZE=350|CAPTION= <scene name='initialview01'>2qm3</scene>, resolution 2.05&Aring;
+<StructureSection load='2qm3' size='340' side='right'caption='[[2qm3]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene> and <scene name='pdbligand=ACY:ACETIC ACID'>ACY</scene>
+<table><tr><td colspan='2'>[[2qm3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QM3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QM3 FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-|GENE= PF1111 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=186497 Pyrococcus furiosus DSM 3638])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-}}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qm3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qm3 OCA], [https://pdbe.org/2qm3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qm3 RCSB], [https://www.ebi.ac.uk/pdbsum/2qm3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qm3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2qm3 TOPSAN]</span></td></tr>
+</table>
-'''Crystal structure of a predicted methyltransferase from Pyrococcus furiosus'''
+== Function ==
+[https://www.uniprot.org/uniprot/Q8U1U4_PYRFU Q8U1U4_PYRFU]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-QM3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QM3 OCA].
+Check<jmol>
-[[Category: Pyrococcus furiosus dsm 3638]]
+  <jmolCheckbox>
-[[Category: Single protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/2qm3_consurf.spt"</scriptWhenChecked>
-[[Category: Clancy, S.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Cuff, M E.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Duggan, E.]]
+  </jmolCheckbox>
-[[Category: Joachimiak, A.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qm3 ConSurf].
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+<div style="clear:both"></div>
-[[Category: ACY]]
+__TOC__
-[[Category: CA]]
+</StructureSection>
-[[Category: mcsg]]
+[[Category: Large Structures]]
-[[Category: midwest center for structural genomic]]
+[[Category: Pyrococcus furiosus DSM 3638]]
-[[Category: protein structure initiative]]
+[[Category: Clancy S]]
-[[Category: psi-2]]
+[[Category: Cuff ME]]
-[[Category: putative methyltransferase]]
+[[Category: Duggan E]]
-[[Category: pyrococcus furiosus]]
+[[Category: Joachimiak A]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:27:13 2008''