2pt3: Difference between revisions

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OCA

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-[[Image:2pt3.gif|left|200px]]
- {{Structure
+==Crystal structure of bovine lactoperoxidase at 2.34 A resolution reveals multiple anion binding sites==
-|PDB= 2pt3 |SIZE=350|CAPTION= <scene name='initialview01'>2pt3</scene>, resolution 2.34&Aring;
+<StructureSection load='2pt3' size='340' side='right'caption='[[2pt3]], [[Resolution|resolution]] 2.34&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> and <scene name='pdbligand=HEM:PROTOPORPHYRIN IX CONTAINING FE'>HEM</scene>
+<table><tr><td colspan='2'>[[2pt3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PT3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PT3 FirstGlance]. <br>
-|ACTIVITY= [http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.34&#8491;</td></tr>
-|GENE=
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene></td></tr>
-}}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pt3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pt3 OCA], [https://pdbe.org/2pt3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pt3 RCSB], [https://www.ebi.ac.uk/pdbsum/2pt3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pt3 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PERL_BOVIN PERL_BOVIN] LPO is an antimicrobial agent. It is thought to help protect the udder from infection and promote growth in newborn calves.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pt/2pt3_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pt3 ConSurf].
+<div style="clear:both"></div>
-'''Crystal structure of bovine lactoperoxidase at 2.34 A resolution reveals multiple anion binding sites'''
+==See Also==
+*[[Lactoperoxidase|Lactoperoxidase]]
+__TOC__
-==About this Structure==
+</StructureSection>
-PT3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PT3 OCA].
 [[Category: Bos taurus]]
-[[Category: Peroxidase]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Betzel C]]
-[[Category: Betzel, C.]]
+[[Category: Kaur P]]
-[[Category: Kaur, P.]]
+[[Category: Sharma S]]
-[[Category: Sharma, S.]]
+[[Category: Singh AK]]
-[[Category: Singh, A K.]]
+[[Category: Singh N]]
-[[Category: Singh, N.]]
+[[Category: Singh TP]]
-[[Category: Singh, T P.]]
-[[Category: CA]]
-[[Category: HEM]]
-[[Category: PO4]]
-[[Category: anion binding site]]
-[[Category: heme]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:17:03 2008''