4ckp: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
==Structure of an N-terminal fragment of Leishmania SAS-6 that contains part of its coiled coil domain==
==Structure of an N-terminal fragment of Leishmania SAS-6 that contains part of its coiled coil domain==
<StructureSection load='4ckp' size='340' side='right' caption='[[4ckp]], [[Resolution|resolution]] 3.45&Aring;' scene=''>
<StructureSection load='4ckp' size='340' side='right'caption='[[4ckp]], [[Resolution|resolution]] 3.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4ckp]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Leima Leima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CKP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4CKP FirstGlance]. <br>
<table><tr><td colspan='2'>[[4ckp]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4CKP FirstGlance]. <br>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4ckm|4ckm]], [[4ckn|4ckn]]</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.45&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ckp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ckp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ckp RCSB], [http://www.ebi.ac.uk/pdbsum/4ckp PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ckp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ckp OCA], [https://pdbe.org/4ckp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ckp RCSB], [https://www.ebi.ac.uk/pdbsum/4ckp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ckp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/E9AFQ5_LEIMA E9AFQ5_LEIMA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 14: Line 17:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
<div class="pdbe-citations 4ckp" style="background-color:#fffaf0;"></div>
==See Also==
*[[Art:Turning cartwheels|Art:Turning cartwheels]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Leima]]
[[Category: Large Structures]]
[[Category: Breugel, M van]]
[[Category: Leishmania major]]
[[Category: Basal body]]
[[Category: Van Breugel M]]
[[Category: Cartwheel]]
[[Category: Centriole]]
[[Category: Structural protein]]
[[Category: Trypanosomatid]]

Latest revision as of 15:11, 20 December 2023

Structure of an N-terminal fragment of Leishmania SAS-6 that contains part of its coiled coil domainStructure of an N-terminal fragment of Leishmania SAS-6 that contains part of its coiled coil domain

Structural highlights

4ckp is a 6 chain structure with sequence from Leishmania major. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.45Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

E9AFQ5_LEIMA

Publication Abstract from PubMed

Centrioles are cylindrical cell organelles with a ninefold symmetric peripheral microtubule array that is essential to template cilia and flagella. They are built around a central cartwheel assembly that is organized through homo-oligomerization of the centriolar protein SAS-6, but whether SAS-6 self-assembly can dictate cartwheel and thereby centriole symmetry is unclear. Here we show that Leishmania major SAS-6 crystallizes as a 9-fold symmetric cartwheel and provide the X-ray structure of this assembly at a resolution of 3.5 A. We furthermore demonstrate that oligomerization of Leishmania SAS-6 can be inhibited by a small molecule in vitro and provide indications for its binding site. Our results firmly establish that SAS-6 can impose cartwheel symmetry on its own and indicate how this process might occur mechanistically in vivo. Importantly, our data also provide a proof-of-principle that inhibition of SAS-6 oligomerization by small molecules is feasible. DOI: http://dx.doi.org/10.7554/eLife.01812.001.

Structure of the SAS-6 cartwheel hub from Leishmania major.,van Breugel M, Wilcken R, McLaughlin SH, Rutherford TJ, Johnson CM Elife. 2014 Jan 1;3:e01812. doi: 10.7554/eLife.01812. PMID:24596152[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. van Breugel M, Wilcken R, McLaughlin SH, Rutherford TJ, Johnson CM. Structure of the SAS-6 cartwheel hub from Leishmania major. Elife. 2014 Jan 1;3:e01812. doi: 10.7554/eLife.01812. PMID:24596152

4ckp, resolution 3.45Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA