4ihc: Difference between revisions

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 ==Crystal structure of probable mannonate dehydratase Dd703_0947 (target EFI-502222) from Dickeya dadantii Ech703==
-<StructureSection load='4ihc' size='340' side='right' caption='[[4ihc]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='4ihc' size='340' side='right'caption='[[4ihc]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[4ihc]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Dickeya_dadantii_ech703 Dickeya dadantii ech703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IHC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IHC FirstGlance]. <br>
+<table><tr><td colspan='2'>[[4ihc]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Musicola_paradisiaca_Ech703 Musicola paradisiaca Ech703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IHC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IHC FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Dd703_0947 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=579405 Dickeya dadantii Ech703])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ihc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ihc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ihc RCSB], [http://www.ebi.ac.uk/pdbsum/4ihc PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ihc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ihc OCA], [https://pdbe.org/4ihc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ihc RCSB], [https://www.ebi.ac.uk/pdbsum/4ihc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ihc ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/C6CBG9_DICDC C6CBG9_DICDC]] Has low dehydratase activity with D-mannonate and D-gluconate, suggesting that these are not physiological substrates and that it has no significant role in the in vivo degradation of these compounds. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref>
+[https://www.uniprot.org/uniprot/DMGD_MUSP7 DMGD_MUSP7] Has low dehydratase activity with D-mannonate and D-gluconate, suggesting that these are not physiological substrates and that it has no significant role in the in vivo degradation of these compounds. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref>
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Dickeya dadantii ech703]]
+[[Category: Large Structures]]
-[[Category: Almo, S C]]
+[[Category: Musicola paradisiaca Ech703]]
-[[Category: Bhosle, R]]
+[[Category: Al Obaidi NF]]
-[[Category: Chowdhury, S]]
+[[Category: Almo SC]]
-[[Category: EFI, Enzyme Function Initiative]]
+[[Category: Bhosle R]]
-[[Category: Evans, B]]
+[[Category: Chowdhury S]]
-[[Category: Gerlt, J A]]
+[[Category: Evans B]]
-[[Category: Glenn, A Scott]]
+[[Category: Gerlt JA]]
-[[Category: Hammonds, J]]
+[[Category: Hammonds J]]
-[[Category: Hillerich, B]]
+[[Category: Hillerich B]]
-[[Category: Imker, H J]]
+[[Category: Imker HJ]]
-[[Category: Love, J]]
+[[Category: Love J]]
-[[Category: Obaidi, N F.Al]]
+[[Category: Patskovsky Y]]
-[[Category: Patskovsky, Y]]
+[[Category: Scott Glenn A]]
-[[Category: Seidel, R D]]
+[[Category: Seidel RD]]
-[[Category: Stead, M]]
+[[Category: Stead M]]
-[[Category: Toro, R]]
+[[Category: Toro R]]
-[[Category: Washington, E]]
+[[Category: Washington E]]
-[[Category: Zencheck, W D]]
+[[Category: Zencheck WD]]
-[[Category: Dehydratase]]
-[[Category: Efi]]
-[[Category: Enzyme function initiative]]
-[[Category: Isomerase]]
-[[Category: Magnesium binding]]
-[[Category: Structural genomic]]