2gs9: Difference between revisions

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[[Image:2gs9.jpg|left|200px]]


{{Structure
==Crystal structure of TT1324 from Thermus thermophilis HB8==
|PDB= 2gs9 |SIZE=350|CAPTION= <scene name='initialview01'>2gs9</scene>, resolution 2.60&Aring;
<StructureSection load='2gs9' size='340' side='right'caption='[[2gs9]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene> and <scene name='pdbligand=FMT:FORMIC ACID'>FMT</scene>
<table><tr><td colspan='2'>[[2gs9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GS9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GS9 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
|GENE=
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gs9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gs9 OCA], [https://pdbe.org/2gs9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gs9 RCSB], [https://www.ebi.ac.uk/pdbsum/2gs9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gs9 ProSAT], [https://www.topsan.org/Proteins/RSGI/2gs9 TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of TT1324 from Thermus thermophilis HB8'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q5SL11_THET8 Q5SL11_THET8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2GS9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GS9 OCA].  
Check<jmol>
[[Category: Single protein]]
  <jmolCheckbox>
[[Category: Thermus thermophilus]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/2gs9_consurf.spt"</scriptWhenChecked>
[[Category: Abe, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Agari, Y.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Ebihara, A.]]
  </jmolCheckbox>
[[Category: Kamitori, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gs9 ConSurf].
[[Category: Kanagawa, M.]]
<div style="clear:both"></div>
[[Category: Kuramitsu, S.]]
__TOC__
[[Category: Kuroishi, C.]]
</StructureSection>
[[Category: Nakagawa, N.]]
[[Category: Large Structures]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Thermus thermophilus HB8]]
[[Category: Yokoyama, S.]]
[[Category: Abe A]]
[[Category: FMT]]
[[Category: Agari Y]]
[[Category: SAH]]
[[Category: Ebihara A]]
[[Category: methyl transferase]]
[[Category: Kamitori S]]
[[Category: national project on protein structural and functional analyse]]
[[Category: Kanagawa M]]
[[Category: nppsfa]]
[[Category: Kuramitsu S]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Kuroishi C]]
[[Category: rsgi]]
[[Category: Nakagawa N]]
[[Category: structural genomic]]
[[Category: Yokoyama S]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:08:24 2008''

Latest revision as of 10:38, 9 October 2024

Crystal structure of TT1324 from Thermus thermophilis HB8Crystal structure of TT1324 from Thermus thermophilis HB8

Structural highlights

2gs9 is a 2 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.6Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SL11_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2gs9, resolution 2.60Å

Drag the structure with the mouse to rotate

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