2eis: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2eis.jpg|left|200px]]
- {{Structure
+==X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8==
-|PDB= 2eis |SIZE=350|CAPTION= <scene name='initialview01'>2eis</scene>, resolution 2.10&Aring;
+<StructureSection load='2eis' size='340' side='right'caption='[[2eis]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-|SITE= <scene name='pdbsite=AC1:Coa+Binding+Site+For+Residue+A+201'>AC1</scene> and <scene name='pdbsite=AC2:Coa+Binding+Site+For+Residue+B+202'>AC2</scene>
+== Structural highlights ==
-|LIGAND= <scene name='pdbligand=COA:COENZYME A'>COA</scene>
+<table><tr><td colspan='2'>[[2eis]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EIS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EIS FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-|GENE= TTHB207 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=274 Thermus thermophilus])
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-}}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eis FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eis OCA], [https://pdbe.org/2eis PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eis RCSB], [https://www.ebi.ac.uk/pdbsum/2eis PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eis ProSAT], [https://www.topsan.org/Proteins/RSGI/2eis TOPSAN]</span></td></tr>
+</table>
-'''X-ray structure of acyl-CoA hydrolase-like protein, TT1379, from Thermus thermophilus HB8'''
+== Function ==
+[https://www.uniprot.org/uniprot/Q53VX2_THET8 Q53VX2_THET8]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-EIS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EIS OCA].
+Check<jmol>
-[[Category: Single protein]]
+  <jmolCheckbox>
-[[Category: Thermus thermophilus]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ei/2eis_consurf.spt"</scriptWhenChecked>
-[[Category: Chen, L.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Chrzas, J.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Ebihara, A.]]
+  </jmolCheckbox>
-[[Category: Fu, Z Q.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2eis ConSurf].
-[[Category: Iino, H.]]
+<div style="clear:both"></div>
-[[Category: Kamitori, S.]]
+__TOC__
-[[Category: Kuramitsu, S.]]
+</StructureSection>
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+[[Category: Large Structures]]
-[[Category: Satoh, S.]]
+[[Category: Thermus thermophilus HB8]]
-[[Category: Wang, B C.]]
+[[Category: Chen L]]
-[[Category: Yokoyama, S.]]
+[[Category: Chrzas J]]
-[[Category: Yoshida, H.]]
+[[Category: Ebihara A]]
-[[Category: COA]]
+[[Category: Fu Z-Q]]
-[[Category: coa binding motif]]
+[[Category: Iino H]]
-[[Category: national project on protein structural and functional analyse]]
+[[Category: Kamitori S]]
-[[Category: nppsfa]]
+[[Category: Kuramitsu S]]
-[[Category: riken structural genomics/proteomics initiative]]
+[[Category: Satoh S]]
-[[Category: rsgi]]
+[[Category: Wang B-C]]
-[[Category: structural genomic]]
+[[Category: Yokoyama S]]
-[[Category: unknown function]]
+[[Category: Yoshida H]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:40:48 2008''