2db0: Difference between revisions

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[[Image:2db0.gif|left|200px]]


{{Structure
==Crystal structure of PH0542==
|PDB= 2db0 |SIZE=350|CAPTION= <scene name='initialview01'>2db0</scene>, resolution 2.2&Aring;
<StructureSection load='2db0' size='340' side='right'caption='[[2db0]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
|SITE=
== Structural highlights ==
|LIGAND=
<table><tr><td colspan='2'>[[2db0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DB0 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
|GENE=  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2db0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2db0 OCA], [https://pdbe.org/2db0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2db0 RCSB], [https://www.ebi.ac.uk/pdbsum/2db0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2db0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2db0 TOPSAN]</span></td></tr>
}}
</table>
 
== Function ==
'''Crystal structure of PH0542'''
[https://www.uniprot.org/uniprot/O58277_PYRHO O58277_PYRHO]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2DB0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DB0 OCA].  
  <jmolCheckbox>
[[Category: Pyrococcus horikoshii]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/2db0_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Handa, N.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Kishishita, S.]]
  </jmolCheckbox>
[[Category: Murayama, K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2db0 ConSurf].
[[Category: Nishino, A.]]
<div style="clear:both"></div>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
__TOC__
[[Category: Shirouzu, M.]]
</StructureSection>
[[Category: heat repeat]]
[[Category: Large Structures]]
[[Category: helical structure]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: national project on protein structural and functional analyse]]
[[Category: Handa N]]
[[Category: nppsfa]]
[[Category: Kishishita S]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Murayama K]]
[[Category: rsgi]]
[[Category: Nishino A]]
[[Category: structural genomic]]
[[Category: Shirouzu M]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:25:04 2008''

Latest revision as of 16:47, 13 March 2024

Crystal structure of PH0542Crystal structure of PH0542

Structural highlights

2db0 is a 2 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O58277_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2db0, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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