3iu1: Difference between revisions

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==Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA==
==Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA==
<StructureSection load='3iu1' size='340' side='right' caption='[[3iu1]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
<StructureSection load='3iu1' size='340' side='right'caption='[[3iu1]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3iu1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IU1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IU1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3iu1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IU1 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MYA:TETRADECANOYL-COA'>MYA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.42&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1rxt|1rxt]], [[3iu2|3iu2]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MYA:TETRADECANOYL-COA'>MYA</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NMT, NMT1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iu1 OCA], [https://pdbe.org/3iu1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iu1 RCSB], [https://www.ebi.ac.uk/pdbsum/3iu1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iu1 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycylpeptide_N-tetradecanoyltransferase Glycylpeptide N-tetradecanoyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.97 2.3.1.97] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iu1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3iu1 RCSB], [http://www.ebi.ac.uk/pdbsum/3iu1 PDBsum]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/NMT1_HUMAN NMT1_HUMAN]] Adds a myristoyl group to the N-terminal glycine residue of certain cellular and viral proteins.  
[https://www.uniprot.org/uniprot/NMT1_HUMAN NMT1_HUMAN] Adds a myristoyl group to the N-terminal glycine residue of certain cellular and viral proteins.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/3iu1_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iu/3iu1_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3iu1 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Glycylpeptide N-tetradecanoyltransferase]]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Arrowsmith, C H]]
[[Category: Large Structures]]
[[Category: Bochkarev, A]]
[[Category: Arrowsmith CH]]
[[Category: Bountra, C]]
[[Category: Bochkarev A]]
[[Category: Brand, S Y]]
[[Category: Bountra C]]
[[Category: Cossar, D]]
[[Category: Brand SY]]
[[Category: Edwards, A M]]
[[Category: Cossar D]]
[[Category: Ferguson, M A.J]]
[[Category: Edwards AM]]
[[Category: Frearson, J A]]
[[Category: Ferguson MAJ]]
[[Category: Hui, R]]
[[Category: Frearson JA]]
[[Category: Hutchinson, A]]
[[Category: Hui R]]
[[Category: Kania, A]]
[[Category: Hutchinson A]]
[[Category: Kozieradzki, I]]
[[Category: Kania A]]
[[Category: Lin, Y H]]
[[Category: Kozieradzki I]]
[[Category: Qiu, W]]
[[Category: Lin Y-H]]
[[Category: Ravichandran, M]]
[[Category: Qiu W]]
[[Category: Robinson, D A]]
[[Category: Ravichandran M]]
[[Category: Structural genomic]]
[[Category: Robinson DA]]
[[Category: Schapira, M]]
[[Category: Schapira M]]
[[Category: Weigelt, J]]
[[Category: Weigelt J]]
[[Category: Wernimont, A]]
[[Category: Wernimont A]]
[[Category: Wyatt, P G]]
[[Category: Wyatt PG]]
[[Category: Acyltransferase]]
[[Category: N-myristoyltransferase]]
[[Category: Nmt1]]
[[Category: Phosphoprotein]]
[[Category: Sgc]]
[[Category: Transferase]]

Latest revision as of 10:58, 6 September 2023

Crystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoACrystal Structure of human type-I N-myristoyltransferase with bound myristoyl-CoA

Structural highlights

3iu1 is a 2 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.42Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NMT1_HUMAN Adds a myristoyl group to the N-terminal glycine residue of certain cellular and viral proteins.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3iu1, resolution 1.42Å

Drag the structure with the mouse to rotate

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OCA