2ark: Difference between revisions

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[[Image:2ark.gif|left|200px]]


{{Structure
==Structure of a flavodoxin from Aquifex aeolicus==
|PDB= 2ark |SIZE=350|CAPTION= <scene name='initialview01'>2ark</scene>, resolution 2.40&Aring;
<StructureSection load='2ark' size='340' side='right'caption='[[2ark]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
<table><tr><td colspan='2'>[[2ark]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ARK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ARK FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
|GENE= fldA, floX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 Aquifex aeolicus])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ark FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ark OCA], [https://pdbe.org/2ark PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ark RCSB], [https://www.ebi.ac.uk/pdbsum/2ark PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ark ProSAT], [https://www.topsan.org/Proteins/MCSG/2ark TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/FLAV_AQUAE FLAV_AQUAE] Low-potential electron donor to a number of redox enzymes (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ar/2ark_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ark ConSurf].
<div style="clear:both"></div>


'''Structure of a flavodoxin from Aquifex aeolicus'''
==See Also==
 
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2ARK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ARK OCA].
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Cuff, M E.]]
[[Category: Cuff ME]]
[[Category: Cymborowski, M.]]
[[Category: Cymborowski M]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Minor W]]
[[Category: Minor, W.]]
[[Category: Quartey P]]
[[Category: Quartey, P.]]
[[Category: Zhou M]]
[[Category: Zhou, M.]]
[[Category: GOL]]
[[Category: PO4]]
[[Category: aquifex aeolicus]]
[[Category: flavodoxin]]
[[Category: fmn]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 15:53:02 2008''

Latest revision as of 14:17, 22 May 2024

Structure of a flavodoxin from Aquifex aeolicusStructure of a flavodoxin from Aquifex aeolicus

Structural highlights

2ark is a 6 chain structure with sequence from Aquifex aeolicus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

FLAV_AQUAE Low-potential electron donor to a number of redox enzymes (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ark, resolution 2.40Å

Drag the structure with the mouse to rotate

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