3kap: Difference between revisions

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 ==Flavodoxin from Desulfovibrio desulfuricans ATCC 27774 (oxidized form)==
-<StructureSection load='3kap' size='340' side='right' caption='[[3kap]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
+<StructureSection load='3kap' size='340' side='right'caption='[[3kap]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3kap]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_desulfuricans_subsp._desulfuricans_str._atcc_27774 Desulfovibrio desulfuricans subsp. desulfuricans str. atcc 27774]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KAP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KAP FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3kap]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_desulfuricans_ATCC_27774 Desulfovibrio desulfuricans ATCC 27774]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KAP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KAP FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3kaq|3kaq]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kap OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kap RCSB], [http://www.ebi.ac.uk/pdbsum/3kap PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kap OCA], [https://pdbe.org/3kap PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kap RCSB], [https://www.ebi.ac.uk/pdbsum/3kap PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kap ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/FLAW_DESDA FLAW_DESDA]] Low-potential electron donor to a number of redox enzymes.
+[https://www.uniprot.org/uniprot/FLAW_DESDA FLAW_DESDA] Low-potential electron donor to a number of redox enzymes.
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ka/3kap_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ka/3kap_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kap ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 27: / Line 28: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 3kap" style="background-color:#fffaf0;"></div>
 ==See Also==
-*[[Flavodoxin|Flavodoxin]]
+*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
 == References ==
 <references/>
 __TOC__
 </StructureSection>
-[[Category: Desulfovibrio desulfuricans subsp. desulfuricans str. atcc 27774]]
+[[Category: Desulfovibrio desulfuricans ATCC 27774]]
-[[Category: Caldeira, J]]
+[[Category: Large Structures]]
-[[Category: LeGall, J]]
+[[Category: Caldeira J]]
-[[Category: Moura, I]]
+[[Category: LeGall J]]
-[[Category: Moura, J J.G]]
+[[Category: Moura I]]
-[[Category: Romao, M J]]
+[[Category: Moura JJG]]
-[[Category: Romero, A]]
+[[Category: Romao MJ]]
-[[Category: Electron transport]]
+[[Category: Romero A]]
-[[Category: Flavodoxin]]
-[[Category: Flavoprotein]]
-[[Category: Fmn]]
-[[Category: Sulfate-reducing bacteria]]
-[[Category: Transport]]