1vc1: Difference between revisions

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-[[Image:1vc1.jpg|left|200px]]
- {{Structure
+==Crystal structure of the TM1442 protein from Thermotoga maritima, a homolog of the Bacillus subtilis general stress response anti-anti-sigma factor RsbV==
-|PDB= 1vc1 |SIZE=350|CAPTION= <scene name='initialview01'>1vc1</scene>, resolution 2.00&Aring;
+<StructureSection load='1vc1' size='340' side='right'caption='[[1vc1]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND=
+<table><tr><td colspan='2'>[[1vc1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VC1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VC1 FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-|GENE= TM1442 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vc1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vc1 OCA], [https://pdbe.org/1vc1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vc1 RCSB], [https://www.ebi.ac.uk/pdbsum/1vc1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vc1 ProSAT]</span></td></tr>
-}}
+</table>
+== Function ==
-'''Crystal structure of the TM1442 protein from Thermotoga maritima, a homolog of the Bacillus subtilis general stress response anti-anti-sigma factor RsbV'''
+[https://www.uniprot.org/uniprot/Y1442_THEMA Y1442_THEMA] In the phosphorylated form it could act as an anti-anti-sigma factor that counteracts an anti-sigma factor and thus releases a sigma factor from inhibition (By similarity).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-==About this Structure==
+Check<jmol>
-VC1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VC1 OCA].
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vc/1vc1_consurf.spt"</scriptWhenChecked>
-==Reference==
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-Crystal structure of the TM1442 protein from Thermotoga maritima, a homolog of the Bacillus subtilis general stress response anti-anti-sigma factor RsbV., Lee JY, Ahn HJ, Ha KS, Suh SW, Proteins. 2004 Jul 1;56(1):176-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15162498 15162498]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Single protein]]
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vc1 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: Ahn, H J.]]
+[[Category: Ahn HJ]]
-[[Category: Ha, K S.]]
+[[Category: Ha KS]]
-[[Category: Lee, J Y.]]
+[[Category: Lee JY]]
-[[Category: Suh, S W.]]
+[[Category: Suh SW]]
-[[Category: anti-anti-sigma factor]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:43:33 2008''