2xd8: Difference between revisions
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==Capsid structure of the infectious Prochlorococcus Cyanophage P-SSP7== | ==Capsid structure of the infectious Prochlorococcus Cyanophage P-SSP7== | ||
< | <SX load='2xd8' size='340' side='right' viewer='molstar' caption='[[2xd8]], [[Resolution|resolution]] 4.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2xd8]] is a 7 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2xd8]] is a 7 chain structure with sequence from [https://en.wikipedia.org/wiki/Prochlorococcus_virus_PSSP7 Prochlorococcus virus PSSP7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XD8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XD8 FirstGlance]. <br> | ||
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.6Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xd8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xd8 OCA], [https://pdbe.org/2xd8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xd8 RCSB], [https://www.ebi.ac.uk/pdbsum/2xd8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xd8 ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q58N30_BPPRP Q58N30_BPPRP] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xd/2xd8_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xd/2xd8_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2xd8 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 23: | Line 27: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
<div class="pdbe-citations 2xd8" style="background-color:#fffaf0;"></div> | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</ | </SX> | ||
[[Category: Prochlorococcus | [[Category: Large Structures]] | ||
[[Category: Baker | [[Category: Prochlorococcus virus PSSP7]] | ||
[[Category: Chisholm | [[Category: Baker ML]] | ||
[[Category: Chiu | [[Category: Chisholm SW]] | ||
[[Category: Dougherty | [[Category: Chiu W]] | ||
[[Category: Fu | [[Category: Dougherty M]] | ||
[[Category: Liu | [[Category: Fu C]] | ||
[[Category: Murata | [[Category: Liu X]] | ||
[[Category: Osburne | [[Category: Murata K]] | ||
[[Category: Schmid | [[Category: Osburne MS]] | ||
[[Category: Sullivan | [[Category: Schmid MF]] | ||
[[Category: Zhang | [[Category: Sullivan MB]] | ||
[[Category: Zhang Q]] | |||
Latest revision as of 13:24, 9 May 2024
Capsid structure of the infectious Prochlorococcus Cyanophage P-SSP7Capsid structure of the infectious Prochlorococcus Cyanophage P-SSP7
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