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==Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375== | ==Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375== | ||
<StructureSection load='2pih' size='340' side='right' caption='[[2pih]], [[Resolution|resolution]] 2.10Å' scene=''> | <StructureSection load='2pih' size='340' side='right'caption='[[2pih]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2pih]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2pih]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PIH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PIH FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | ||
<tr><td class="sblockLbl"><b>[[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pih FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pih OCA], [https://pdbe.org/2pih PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pih RCSB], [https://www.ebi.ac.uk/pdbsum/2pih PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pih ProSAT], [https://www.topsan.org/Proteins/NESGC/2pih TOPSAN]</span></td></tr> | ||
<table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/YMCA_BACSU YMCA_BACSU] May work together with YlbF to regulate community development. | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pi/2pih_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pi/2pih_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pih ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacillus subtilis]] | [[Category: Bacillus subtilis]] | ||
[[Category: Abashidze | [[Category: Large Structures]] | ||
[[Category: Acton | [[Category: Abashidze M]] | ||
[[Category: Baran | [[Category: Acton TB]] | ||
[[Category: Cunningham | [[Category: Baran MC]] | ||
[[Category: Fang | [[Category: Cunningham K]] | ||
[[Category: Forouhar | [[Category: Fang Y]] | ||
[[Category: Hunt | [[Category: Forouhar F]] | ||
[[Category: Liu | [[Category: Hunt JF]] | ||
[[Category: Ma | [[Category: Liu J]] | ||
[[Category: Montelione | [[Category: Ma L-C]] | ||
[[Category: Montelione GT]] | |||
[[Category: Rost | [[Category: Rost B]] | ||
[[Category: Seetharaman | [[Category: Seetharaman J]] | ||
[[Category: Tong | [[Category: Tong L]] | ||
[[Category: Wang | [[Category: Wang D]] | ||
[[Category: Xia | [[Category: Xia R]] | ||
Latest revision as of 08:25, 17 October 2024
Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375
Structural highlights
FunctionYMCA_BACSU May work together with YlbF to regulate community development. Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. |
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