2fi1: Difference between revisions

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==The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4==
==The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4==
<StructureSection load='2fi1' size='340' side='right' caption='[[2fi1]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
<StructureSection load='2fi1' size='340' side='right'caption='[[2fi1]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2fi1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FI1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FI1 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2fi1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FI1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FI1 FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene><br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fi1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fi1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2fi1 RCSB], [http://www.ebi.ac.uk/pdbsum/2fi1 PDBsum], [http://www.topsan.org/Proteins/MCSG/2fi1 TOPSAN]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
<table>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fi1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fi1 OCA], [https://pdbe.org/2fi1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fi1 RCSB], [https://www.ebi.ac.uk/pdbsum/2fi1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fi1 ProSAT], [https://www.topsan.org/Proteins/MCSG/2fi1 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A0A0H2UPC8_STRPN A0A0H2UPC8_STRPN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/2fi1_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/2fi1_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fi1 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Streptococcus pneumoniae]]
[[Category: Large Structures]]
[[Category: Abdullah, J.]]
[[Category: Streptococcus pneumoniae TIGR4]]
[[Category: Collart, F.]]
[[Category: Abdullah J]]
[[Category: Joachimiak, A.]]
[[Category: Collart F]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Joachimiak A]]
[[Category: Zhang, R.]]
[[Category: Zhang R]]
[[Category: Zhou, M.]]
[[Category: Zhou M]]
[[Category: Haloacid dehalogenase-like family]]
[[Category: Hydrolase]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]

Latest revision as of 12:23, 14 February 2024

The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4

Structural highlights

2fi1 is a 1 chain structure with sequence from Streptococcus pneumoniae TIGR4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.4Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A0A0H2UPC8_STRPN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2fi1, resolution 1.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA