1vee: Difference between revisions

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OCA

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 ==NMR structure of the hypothetical rhodanese domain At4g01050 from Arabidopsis thaliana==
-<StructureSection load='1vee' size='340' side='right' caption='[[1vee]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+<StructureSection load='1vee' size='340' side='right'caption='[[1vee]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1vee]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VEE FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1vee]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VEE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VEE FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN CDNA RAFL06-68-J04 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vee FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vee OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vee RCSB], [http://www.ebi.ac.uk/pdbsum/1vee PDBsum], [http://www.topsan.org/Proteins/RSGI/1vee TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vee FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vee OCA], [https://pdbe.org/1vee PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vee RCSB], [https://www.ebi.ac.uk/pdbsum/1vee PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vee ProSAT], [https://www.topsan.org/Proteins/RSGI/1vee TOPSAN]</span></td></tr>
-<table>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/STR4_ARATH STR4_ARATH] Rhodanese domain-containing protein required for anchoring ferredoxin--NADP reductase to the thylakoid membranes and sustaining efficient linear electron flow (LEF).<ref>PMID:19682289</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1vee_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ve/1vee_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vee ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 24: / Line 27: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 1vee" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
@@ Line 29: / Line 33: @@
 </StructureSection>
 [[Category: Arabidopsis thaliana]]
-[[Category: Guntert, P.]]
+[[Category: Large Structures]]
-[[Category: Inoue, M.]]
+[[Category: Guntert P]]
-[[Category: Kigawa, T.]]
+[[Category: Inoue M]]
-[[Category: Koshiba, S.]]
+[[Category: Kigawa T]]
-[[Category: Lopez-Mendez, B.]]
+[[Category: Koshiba S]]
-[[Category: Pantoja-Uceda, D.]]
+[[Category: Lopez-Mendez B]]
-[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+[[Category: Pantoja-Uceda D]]
-[[Category: Seki, M.]]
+[[Category: Seki M]]
-[[Category: Shinozaki, K.]]
+[[Category: Shinozaki K]]
-[[Category: Shirouzu, M.]]
+[[Category: Shirouzu M]]
-[[Category: Tanaka, A.]]
+[[Category: Tanaka A]]
-[[Category: Terada, T.]]
+[[Category: Terada T]]
-[[Category: Yokoyama, S.]]
+[[Category: Yokoyama S]]
-[[Category: Hypothetical protein]]
-[[Category: Rhodanese domain]]
-[[Category: Riken structural genomics/proteomics initiative]]
-[[Category: Rsgi]]
-[[Category: Structural genomic]]
-[[Category: Unknown function]]