1l5e: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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 ==The domain-swapped dimer of CV-N in solution==
-<StructureSection load='1l5e' size='340' side='right' caption='[[1l5e]], [[NMR_Ensembles_of_Models | 1 NMR models]]' scene=''>
+<StructureSection load='1l5e' size='340' side='right'caption='[[1l5e]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1l5e]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Nostoc_ellipsosporum Nostoc ellipsosporum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L5E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1L5E FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1l5e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Nostoc_ellipsosporum Nostoc ellipsosporum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L5E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1L5E FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ezm|2ezm]], [[3ezm|3ezm]], [[1l5b|1l5b]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 1 model</td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1l5e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l5e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1l5e RCSB], [http://www.ebi.ac.uk/pdbsum/1l5e PDBsum]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1l5e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l5e OCA], [https://pdbe.org/1l5e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1l5e RCSB], [https://www.ebi.ac.uk/pdbsum/1l5e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1l5e ProSAT]</span></td></tr>
-<table>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CVN_NOSEL CVN_NOSEL] Mannose-binding lectin.<ref>PMID:9210678</ref> <ref>PMID:12678493</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l5/1l5e_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l5/1l5e_consurf.spt"</scriptWhenChecked>
-     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1l5e ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 24: / Line 27: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 1l5e" style="background-color:#fffaf0;"></div>
 == References ==
 <references/>
 __TOC__
 </StructureSection>
+[[Category: Large Structures]]
 [[Category: Nostoc ellipsosporum]]
-[[Category: Barrientos, L G.]]
+[[Category: Barrientos LG]]
-[[Category: Botos, I.]]
+[[Category: Botos I]]
-[[Category: Boyd, M R.]]
+[[Category: Boyd MR]]
-[[Category: Gronenborn, A M.]]
+[[Category: Gronenborn AM]]
-[[Category: Han, Z.]]
+[[Category: Han Z]]
-[[Category: Keefe, B R.O.]]
+[[Category: Louis JM]]
-[[Category: Louis, J M.]]
+[[Category: Mori T]]
-[[Category: Mori, T.]]
+[[Category: O'Keefe BR]]
-[[Category: Wlodawer, A.]]
+[[Category: Wlodawer A]]
-[[Category: 3d domain-swapping]]
-[[Category: Antiviral protein]]
-[[Category: Cyanovirin-n]]
-[[Category: Protein folding]]