1hiy: Difference between revisions

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-==BINDING OF NUCLEOTIDES TO NDP KINASE==
-<StructureSection load='1hiy' size='340' side='right' caption='[[1hiy]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
+==Binding of nucleotides to NDP kinase==
+<StructureSection load='1hiy' size='340' side='right'caption='[[1hiy]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1hiy]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Dictyostelium_discoideum Dictyostelium discoideum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HIY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1HIY FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1hiy]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Dictyostelium_discoideum Dictyostelium discoideum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HIY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HIY FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3AN:3-DEOXY+3-AMINO+ADENOSINE-5-DIPHOSPHATE'>3AN</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1b4s|1b4s]], [[1b99|1b99]], [[1bux|1bux]], [[1f3f|1f3f]], [[1f6t|1f6t]], [[1hhq|1hhq]], [[1kdn|1kdn]], [[1leo|1leo]], [[1lwx|1lwx]], [[1ncl|1ncl]], [[2bef|2bef]]</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3AN:3-DEOXY+3-AMINO+ADENOSINE-5-DIPHOSPHATE'>3AN</scene></td></tr>
-<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hiy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hiy OCA], [https://pdbe.org/1hiy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hiy RCSB], [https://www.ebi.ac.uk/pdbsum/1hiy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hiy ProSAT]</span></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hiy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hiy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1hiy RCSB], [http://www.ebi.ac.uk/pdbsum/1hiy PDBsum]</span></td></tr>
+</table>
-<table>
+== Function ==
+[https://www.uniprot.org/uniprot/NDKC_DICDI NDKC_DICDI]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hi/1hiy_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hi/1hiy_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
    </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hiy ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 26: / Line 28: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 1hiy" style="background-color:#fffaf0;"></div>
 ==See Also==
-*[[Nucleoside diphosphate kinase|Nucleoside diphosphate kinase]]
+*[[Nucleoside diphosphate kinase 3D structures|Nucleoside diphosphate kinase 3D structures]]
 == References ==
 <references/>
@@ Line 34: / Line 37: @@
 </StructureSection>
 [[Category: Dictyostelium discoideum]]
-[[Category: Nucleoside-diphosphate kinase]]
+[[Category: Large Structures]]
-[[Category: Cervoni, L.]]
+[[Category: Cervoni L]]
-[[Category: Giartoso, A.]]
+[[Category: Giartoso A]]
-[[Category: Gonin, P.]]
+[[Category: Gonin P]]
-[[Category: Janin, J.]]
+[[Category: Janin J]]
-[[Category: Lascu, I.]]
+[[Category: Lascu I]]
-[[Category: Merouani, M.]]
+[[Category: Merouani M]]
-[[Category: Morr, M.]]
+[[Category: Morr M]]
-[[Category: Xu, Y.]]
+[[Category: Xu Y]]
-[[Category: Kinase]]
-[[Category: Metabolic role]]
-[[Category: Transferase]]