1d2i: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
 ==CRYSTAL STRUCTURE OF RESTRICTION ENDONUCLEASE BGLII COMPLEXED WITH DNA 16-MER==
-<StructureSection load='1d2i' size='340' side='right' caption='[[1d2i]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+<StructureSection load='1d2i' size='340' side='right'caption='[[1d2i]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[1d2i]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D2I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1D2I FirstGlance]. <br>
+<table><tr><td colspan='2'>[[1d2i]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D2I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D2I FirstGlance]. <br>
-</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bhm|1bhm]]</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d2i OCA], [https://pdbe.org/1d2i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d2i RCSB], [https://www.ebi.ac.uk/pdbsum/1d2i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d2i ProSAT]</span></td></tr>
-<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1d2i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d2i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1d2i RCSB], [http://www.ebi.ac.uk/pdbsum/1d2i PDBsum]</span></td></tr>
+</table>
-<table>
+== Function ==
+[https://www.uniprot.org/uniprot/T2B2_BACIU T2B2_BACIU] Recognizes the double-stranded sequence AGATCT and cleaves after A-1.
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 16: / Line 18: @@
 From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 </div>
+<div class="pdbe-citations 1d2i" style="background-color:#fffaf0;"></div>
 ==See Also==
-*[[Endonuclease|Endonuclease]]
+*[[Endonuclease 3D structures|Endonuclease 3D structures]]
 == References ==
 <references/>
@@ Line 24: / Line 27: @@
 </StructureSection>
 [[Category: Bacillus subtilis]]
-[[Category: Aggarwal, A K.]]
+[[Category: Large Structures]]
-[[Category: Kucera, R.]]
+[[Category: Aggarwal AK]]
-[[Category: Lukacs, C M.]]
+[[Category: Kucera R]]
-[[Category: Schildkraut, I.]]
+[[Category: Lukacs CM]]
-[[Category: Hydrolase-dna complex]]
+[[Category: Schildkraut I]]
-[[Category: Protein-dna complex]]
-[[Category: Restriction endonuclease]]
-[[Category: Restriction enzyme]]