RmlC: Difference between revisions

Michal Harel (talk | contribs)
New page: <StructureSection load='2ixc' size='340' side='right' caption='Structure of RmlC complex with dTPD-rhamnose (PDB code 2ixc).' scene=''> '''RmlC''' is an enzyme of the dTPD-rhamnose p...
 
Michal Harel (talk | contribs)
No edit summary
 
(12 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
<StructureSection load='2ixc' size='350' side='right' caption='Structure of RmlC complex with dTPD-rhamnose (PDB code [[2ixc]]).' scene='59/597941/Cv/1'>
<StructureSection load='2ixc' size='340' side='right' caption='Structure of RmlC complex with dTPD-rhamnose (PDB code [[2ixc]]).' scene=''>
 
'''RmlC''' is an enzyme of the dTPD-rhamnose pathway.  Deoxy-thymidine diphosphate (dTDP)-L-rhamnose is the precursor of L-rhamnose.  L-rhamnose is a sugar component of microbial cell wall and is absent in human.
 
== Function ==
== Function ==
 
'''RmlC''' or '''dTDP-4-dehydrorhamnose 3,5-epimerase''' or '''dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase''' is an epimerase enzyme of the dTPD-rhamnose pathway.  Deoxy-thymidine diphosphate (dTDP)-L-rhamnose is the precursor of L-rhamnose.  L-rhamnose is a sugar component of microbial cell wall and is absent in human<ref>PMID:10802738</ref>.
== Disease ==


== Relevance ==
== Relevance ==
 
Inhibitors of RmlC can serve as potential antimicrobial drugs<ref>PMID:15103135</ref>.
Inhibitors of RmlC can serve as potential antimicrobial drugs.


== Structural highlights ==
== Structural highlights ==
The <scene name='59/597941/Cv/4'>active site of RmlC contains the reaction product DTDP-L-rhamnose</scene><ref>PMID:17046787</ref>. Water molecules are shown as red spheres.
</StructureSection>


==3D structures of RmlC==
==3D structures of RmlC==


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|


[[1pm7]], [[1upi]] – MtRmlC – ''Mycobacterium tuberculosis''<br />
*RmlC
[[2ixj]], [[1rtv]] – PaRmlC – ''Pseudomonas aeruginosa''<br />
[[1nxm]] – SsRmlC – ''Streptococcus suis''<br />
[[1ep0]] – MetRmlC – ''Methanothermobacter thermautotrophicus''<br />
[[1dzr]] – StRmlC – ''Salmonella typhimurium''<br />


===RmlC complexes===
**[[1pm7]], [[1upi]] – MtRmlC – ''Mycobacterium tuberculosis''<br />
**[[2ixj]], [[1rtv]] – PaRmlC – ''Pseudomonas aeruginosa''<br />
**[[1nxm]] – SsRmlC – ''Streptococcus suis''<br />
**[[1ep0]] – MetRmlC – ''Methanothermobacter thermautotrophicus''<br />
**[[1dzr]] – StRmlC – ''Salmonella typhimurium''<br />


[[2ixc]] – MtRmlC + dTDP rhamnose <br />
*RmlC complexes
[[2ixh]] – PaRmlC + dTDP rhamnose <br />
[[2ixl]] – SsRmlC + dTDP rhamnose <br />
[[2ixk]] – PaRmlC + dTDP-keto rhamnose <br />
[[1nyw]] – SsRmlC + dTDP glucose <br />
[[1nzc]] – SsRmlC + dTDP xylose <br />
[[1epz]] – MetRmlC + TDP <br />
[[3ryk]] – RmlC + TDP + pyrophosphate – ''Bacillus anthracis''<br />
[[1dzt]] – StRmlC + acetylthymidine diphosphate<br />


**[[2ixc]] – MtRmlC + dTDP rhamnose <br />
**[[2ixh]] – PaRmlC + dTDP rhamnose <br />
**[[2ixl]] – SsRmlC + dTDP rhamnose <br />
**[[2ixk]] – PaRmlC + dTDP-keto rhamnose <br />
**[[6ndr]] – RmlC + dTDP-keto rhamnose – ''Legionella pneumophila''<br />
**[[1nyw]] – SsRmlC + dTDP glucose <br />
**[[1nzc]] – SsRmlC + dTDP xylose <br />
**[[1epz]] – MetRmlC + TDP <br />
**[[3ryk]] – RmlC + TDP + pyrophosphate – ''Bacillus anthracis''<br />
**[[1dzt]] – StRmlC + acetylthymidine diphosphate<br />


}}
== References ==
== References ==
<references/>
<references/>


[[Category:Topic Page]]
[[Category:Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky