4usx: Difference between revisions

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-'''Unreleased structure'''
-The entry 4usx is ON HOLD  until Paper Publication
+==The Structure of the C-terminal YadA-like domain of BPSL2063 from Burkholderia pseudomallei==
+<StructureSection load='4usx' size='340' side='right'caption='[[4usx]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[4usx]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_pseudomallei_K96243 Burkholderia pseudomallei K96243]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4USX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4USX FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4usx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4usx OCA], [https://pdbe.org/4usx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4usx RCSB], [https://www.ebi.ac.uk/pdbsum/4usx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4usx ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q63TA4_BURPS Q63TA4_BURPS]
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+The 1.8 A resolution crystal structure of a conserved domain of the potential Burkholderia pseudomallei antigen and trimeric autotransporter BPSL2063 is presented as a structural vaccinology target for melioidosis vaccine development. Since BPSL2063 (1090 amino acids) hosts only one conserved domain, and the expression/purification of the full-length protein proved to be problematic, a domain-filtering library was generated using beta-lactamase as a reporter gene to select further BPSL2063 domains. As a result, two domains (D1 and D2) were identified and produced in soluble form in Escherichia coli. Furthermore, as a general tool, a genomic open reading frame-filtering library from the B. pseudomallei genome was also constructed to facilitate the selection of domain boundaries from the entire ORFeome. Such an approach allowed the selection of three potential protein antigens that were also produced in soluble form. The results imply the further development of ORF-filtering methods as a tool in protein-based research to improve the selection and production of soluble proteins or domains for downstream applications such as X-ray crystallography.
-Authors: Perletti, L., Gourlay, L.J., Peano, C., Pietrelli, A., DeBellis, G., Deantonio, C., Santoro, C., Sblattero, D., Bolognesi, M.
+Selecting soluble/foldable protein domains through single-gene or genomic ORF filtering: structure of the head domain of Burkholderia pseudomallei antigen BPSL2063.,Gourlay LJ, Peano C, Deantonio C, Perletti L, Pietrelli A, Villa R, Matterazzo E, Lassaux P, Santoro C, Puccio S, Sblattero D, Bolognesi M Acta Crystallogr D Biol Crystallogr. 2015 Nov 1;71(Pt 11):2227-35. doi:, 10.1107/S1399004715015680. Epub 2015 Oct 31. PMID:26527140<ref>PMID:26527140</ref>
-Description: The Structure of the C-terminal YadA-like domain of BPSL2063 from Burkholderia pseudomallei
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+</div>
+<div class="pdbe-citations 4usx" style="background-color:#fffaf0;"></div>
+==See Also==
+*[[Adhesin 3D structures|Adhesin 3D structures]]
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Burkholderia pseudomallei K96243]]
+[[Category: Large Structures]]
+[[Category: Bolognesi M]]
+[[Category: DeBellis G]]
+[[Category: Deantonio C]]
+[[Category: Gourlay LJ]]
+[[Category: Peano C]]
+[[Category: Perletti L]]
+[[Category: Pietrelli A]]
+[[Category: Santoro C]]
+[[Category: Sblattero D]]