3zyb: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
==CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION==
==CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION==
<StructureSection load='3zyb' size='340' side='right' caption='[[3zyb]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
<StructureSection load='3zyb' size='340' side='right'caption='[[3zyb]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3zyb]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>
<table><tr><td colspan='2'>[[3zyb]] is a 11 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZYB FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene><br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29&#8491;</td></tr>
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=PHB:P-HYDROXYBENZOIC+ACID'>PHB</scene></td></tr>
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vxj|2vxj]], [[1oko|1oko]], [[1uoj|1uoj]], [[2wyf|2wyf]], [[1l7l|1l7l]], [[3zyf|3zyf]], [[3zyh|3zyh]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [https://pdbe.org/3zyb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [https://www.ebi.ac.uk/pdbsum/3zyb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zyb ProSAT]</span></td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zyb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zyb RCSB], [http://www.ebi.ac.uk/pdbsum/3zyb PDBsum]</span></td></tr>
</table>
<table>
== Function ==
[https://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.


==See Also==
==See Also==
Line 13: Line 15:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Pseudomonas aeruginosa]]
[[Category: Large Structures]]
[[Category: Bergmann, M.]]
[[Category: Pseudomonas aeruginosa PAO1]]
[[Category: Cacciarini, M.]]
[[Category: Synthetic construct]]
[[Category: Camara, M.]]
[[Category: Bergmann M]]
[[Category: Darbre, T.]]
[[Category: Cacciarini M]]
[[Category: Garg, D.]]
[[Category: Camara M]]
[[Category: Hurley, M.]]
[[Category: Darbre T]]
[[Category: Kadam, R U.]]
[[Category: Garg D]]
[[Category: Nativi, C.]]
[[Category: Hurley M]]
[[Category: Reymond, J L.]]
[[Category: Kadam RU]]
[[Category: Sattler, M.]]
[[Category: Nativi C]]
[[Category: Smyth, A R.]]
[[Category: Reymond J-L]]
[[Category: Stocker, A.]]
[[Category: Sattler M]]
[[Category: Swiderska, M A.]]
[[Category: Smyth AR]]
[[Category: Williams, P.]]
[[Category: Stocker A]]
[[Category: Adhesin]]
[[Category: Swiderska MA]]
[[Category: Galactose-specific]]
[[Category: Williams P]]
[[Category: Galactoside]]
[[Category: Glycosphingolipid-antigen]]
[[Category: Sugar binding protein]]

Latest revision as of 14:15, 20 December 2023

CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTIONCRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH GALAG0 AT 2.3 A RESOLUTION

Structural highlights

3zyb is a 11 chain structure with sequence from Pseudomonas aeruginosa PAO1 and Synthetic construct. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.29Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PA1L_PSEAE D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.

See Also

3zyb, resolution 2.29Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3zyb&oldid=3997629"