3cdd: Difference between revisions

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New page: left|200px<br /><applet load="3cdd" size="350" color="white" frame="true" align="right" spinBox="true" caption="3cdd, resolution 2.10Å" /> '''Crystal structure of...
 
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[[Image:3cdd.jpg|left|200px]]<br /><applet load="3cdd" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3cdd, resolution 2.10&Aring;" />
'''Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis'''<br />


==About this Structure==
==Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis==
3CDD is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDD OCA].  
<StructureSection load='3cdd' size='340' side='right'caption='[[3cdd]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
[[Category: Bacteria]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[3cdd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Sheon Sheon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CDD FirstGlance]. <br>
[[Category: Chang, C.]]
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Edwards, A M.]]
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SO_2699 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=211586 SHEON])</td></tr>
[[Category: Evdokimova, E.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cdd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cdd OCA], [https://pdbe.org/3cdd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cdd RCSB], [https://www.ebi.ac.uk/pdbsum/3cdd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cdd ProSAT], [https://www.topsan.org/Proteins/MCSG/3cdd TOPSAN]</span></td></tr>
[[Category: Joachimiak, A.]]
</table>
[[Category: Kudritska, M.]]
== Evolutionary Conservation ==
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Savchenko, A.]]
Check<jmol>
[[Category: mcsg]]
  <jmolCheckbox>
[[Category: midwest center for structural genomic]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/3cdd_consurf.spt"</scriptWhenChecked>
[[Category: muso2]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: protein structure initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: psi-2]]
  </jmolCheckbox>
[[Category: shewanella oneidensis mr-1]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cdd ConSurf].
[[Category: structural genomic]]
<div style="clear:both"></div>
[[Category: structural protein]]
__TOC__
 
</StructureSection>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Mar 14 09:41:10 2008''
[[Category: Large Structures]]
[[Category: Sheon]]
[[Category: Chang, C]]
[[Category: Edwards, A M]]
[[Category: Evdokimova, E]]
[[Category: Joachimiak, A]]
[[Category: Kudritska, M]]
[[Category: Structural genomic]]
[[Category: Savchenko, A]]
[[Category: Mcsg]]
[[Category: Muso2]]
[[Category: PSI, Protein structure initiative]]
[[Category: Shewanella oneidensis mr-1]]
[[Category: Structural protein]]

Latest revision as of 10:51, 27 January 2022

Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensisCrystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis

Structural highlights

3cdd is a 6 chain structure with sequence from Sheon. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:SO_2699 (SHEON)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3cdd, resolution 2.10Å

Drag the structure with the mouse to rotate

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OCA