2z8q: Difference between revisions

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[[Image:2z8q.jpg|left|200px]]<br /><applet load="2z8q" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2z8q, resolution 1.70&Aring;" />
'''ferredoxin from Pyrococcus furiosus, D14C variant'''<br />


==About this Structure==
==ferredoxin from Pyrococcus furiosus, D14C variant==
2Z8Q is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus] with <scene name='pdbligand=NCO:'>NCO</scene> and <scene name='pdbligand=SF4:'>SF4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z8Q OCA].
<StructureSection load='2z8q' size='340' side='right'caption='[[2z8q]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
[[Category: Pyrococcus furiosus]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2z8q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z8Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z8Q FirstGlance]. <br>
[[Category: Christensen, H E.M.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
[[Category: Harris, P.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NCO:COBALT+HEXAMMINE(III)'>NCO</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
[[Category: Johannessen, M N.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z8q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z8q OCA], [https://pdbe.org/2z8q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z8q RCSB], [https://www.ebi.ac.uk/pdbsum/2z8q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z8q ProSAT]</span></td></tr>
[[Category: NCO]]
</table>
[[Category: SF4]]
== Function ==
[[Category: 3fe-4s]]
[https://www.uniprot.org/uniprot/FER_PYRFU FER_PYRFU] Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
[[Category: 4fe-4s]]
== Evolutionary Conservation ==
[[Category: electron transport]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: ferredoxin iron-sulfur cluster]]
Check<jmol>
[[Category: metal-binding]]
  <jmolCheckbox>
[[Category: pyrococcus furiosus]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z8/2z8q_consurf.spt"</scriptWhenChecked>
[[Category: transport]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: two molecules in asymmetric unit]]
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z8q ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 19:00:57 2008''
==See Also==
*[[Ferredoxin|Ferredoxin]]
*[[Ferredoxin 3D structures|Ferredoxin 3D structures]]
*[[Iron–sulfur proteins|Iron–sulfur proteins]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus furiosus DSM 3638]]
[[Category: Christensen HEM]]
[[Category: Harris P]]
[[Category: Johannessen MN]]

Latest revision as of 16:26, 1 November 2023

ferredoxin from Pyrococcus furiosus, D14C variantferredoxin from Pyrococcus furiosus, D14C variant

Structural highlights

2z8q is a 2 chain structure with sequence from Pyrococcus furiosus DSM 3638. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FER_PYRFU Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2z8q, resolution 1.70Å

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