2p6m: Difference between revisions

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[[Image:2p6m.jpg|left|200px]]<br /><applet load="2p6m" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2p6m, resolution 1.90&Aring;" />
'''Crystal structure of TTHB049 from Thermus thermophilus HB8'''<br />


==About this Structure==
==Crystal structure of TTHB049 from Thermus thermophilus HB8==
2P6M is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] with <scene name='pdbligand=NA:'>NA</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Alpha-ribazole_phosphatase Alpha-ribazole phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.73 3.1.3.73] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P6M OCA].  
<StructureSection load='2p6m' size='340' side='right'caption='[[2p6m]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Alpha-ribazole phosphatase]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2p6m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P6M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P6M FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p6m OCA], [https://pdbe.org/2p6m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p6m RCSB], [https://www.ebi.ac.uk/pdbsum/2p6m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p6m ProSAT], [https://www.topsan.org/Proteins/RSGI/2p6m TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q53WB3_THET8 Q53WB3_THET8]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p6/2p6m_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p6m ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Kunishima, N.]]
[[Category: Kunishima N]]
[[Category: Matsuura, Y.]]
[[Category: Matsuura Y]]
[[Category: Morikawa, Y.]]
[[Category: Morikawa Y]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Shimada H]]
[[Category: Shimada, H.]]
[[Category: Sugahara M]]
[[Category: Sugahara, M.]]
[[Category: GOL]]
[[Category: NA]]
[[Category: hydrolase]]
[[Category: national project on protein structural and functional analyses]]
[[Category: nppsfa]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomics]]
[[Category: thermus thermophilus hb8]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:26:30 2008''

Latest revision as of 11:59, 25 October 2023

Crystal structure of TTHB049 from Thermus thermophilus HB8Crystal structure of TTHB049 from Thermus thermophilus HB8

Structural highlights

2p6m is a 2 chain structure with sequence from Thermus thermophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q53WB3_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2p6m, resolution 1.90Å

Drag the structure with the mouse to rotate

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