Peroxiredoxin: Difference between revisions

Michal Harel (talk | contribs)
No edit summary
Michal Harel (talk | contribs)
No edit summary
 
(24 intermediate revisions by 3 users not shown)
Line 1: Line 1:
[[Image:1qq2.png|left|200px|thumb|Crystal Structure of Peroxiredoxin ([[1qq2]])]]
<StructureSection load='1qq2' size='350' side='right' scene='43/433646/Cv/2' caption='Typical 2-cys peroxiredoxin dimer complex with Cl- ions [[1qq2]]'>
{{STRUCTURE_1qq2|  PDB=1qq2  | SIZE=400| SCENE= |right|CAPTION=Peroxiredoxin dimer complex with Cl- ions [[1qq2]]}}
== Function ==
[[Peroxiredoxin]] (Prx) is an antioxidant enzyme.  In the Prxs the active-site Cys is oxidized to sulfenic acid hyper oxide forming a Cys-SOH intermediate.  A second Cys residue resolves the intermediate to a protein disulfide bond.  The Prxs are divided into 3 types according to their intermediate resolving mechanism: '''typical 2-Cysteine Prx''' in which the Cys-Cys bond is formed between two subunits, '''atypical 2-Cys Prx''' in which the bond is formed within one subunit and '''1-Cysteine Prx''' which uses a single Cys residue for the catalysis. '''Prx Q''' is the plant homolog of [[Bacterioferritin comigratory protein]].


'''Typical 2-Cys Prx'''<br />
* '''Prx 1''' interacts with signaling molecules<ref>PMID:19923889</ref>.
* '''Prx 2''' is essential for sustaining erythrocyte life span<ref>PMID:18479207</ref>.
* '''Prx 3''' is mitochondria-specific.<ref>PMID:15280382</ref>.
* '''Prx 4''' localizes to the cytoplasm and regulates the activation of NF-κB<ref>PMID:25656995</ref>.
'''Atypical 2-Cys Prx'''<br />
* '''Prx 5''' protects from mitochondrial DNA damage induced by H<sub>2</sub>O<sub>2</sub><ref>PMID:15848167</ref>.
'''1-Cys Prx'''<br />
* '''Prx 6''' reduces peroxidized membrane phospholipids<ref>PMID:20919932</ref>.


== Relevance ==
Prx are over expressed in cancer tissue<ref>PMID:11497302</ref>.  Prx 4 mediates osteoclast activation in cancer cells<ref>PMID:25779674</ref>.


== Structural highlights ==
In the typical 2-cysteine Prx the <scene name='43/433646/Cv/5'>Cys-Cys bond is formed between two subunits</scene><ref>PMID:10535922</ref>. <scene name='43/433646/Cv/6'>Cl coordination site</scene>. Water molecules is shown as red sphere.


[[Peroxiredoxin]] (Prx) is an antioxidant enzyme.  In the Prxs the active-site Cys is oxidized to sulfenic acid byperoxide.  The Prxs are divided into typical 2-Cys Prx, atypical 2-Cys Prx and 1-Cys Prx. Prx 5 is expressed in mammalian tissue. The images at the left and at the right correspond to one representative Prx, ''i.e.'' the crystal structure of Peroxiredoxin from rat ([[1qq2]]).
{{TOC limit|limit=2}}
<br />
<br />
<br />
<br />
<br />
<br />
<br />
== 3D Structures of Peroxiredoxin ==  
== 3D Structures of Peroxiredoxin ==  
[[Peroxiredoxin 3D structures]]


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
</StructureSection>
 
[[1qq2]] – 2Cys-Prx – rat<br />
[[2c0d]] – Pf2Cys-Prx – ''Plasmodium falciparum''<br />
[[1xiy]] – Pf1Cys-Prx<br />
[[1xcc]], [[2h01]], [[3tb2]] - 1Cys-Prx – ''Plasmodium yoelii''<br />
[[2i81]] - 2Cys-Prx – ''Plasmodium vivax''<br />
[[1qmv]] - h2Cys-Prx – human<br />
[[2a4v]] – yPrx dot5 C-terminal (mutant) – yeast<br />
[[3cmi]] – yPrx hyr1<br />
[[4g2e]] – Prx – ''Sulfolobus tokodaii''<br />
[[3sbc]] – yPrx Tsa1 (mutant)<br />
[[1uul]] - 2Cys-Prx – ''Trypanosoma cruzi''<br />
[[1we0]] – Prx – ''Amphibacillus xylanus''<br />
[[2cv4]], [[2cx3]], [[2cx4]] – Prx – ''Aeropyrum pernix''<br />
[[3drn]] – SsPrx – ''Sulfolobus solfataricus''<br />
[[3hjp]] – SsPrx (mutant)<br />
[[3ixr]] – Prx PRXQ (mutant) – ''Xylella fastidiosa''<br />
 
===Peroxiredoxin 1===
 
[[2rii]], [[3hy2]] – hPrx 1 (mutant)+sulfiredoxin 1<br />
[[2z9s]] – Prx 1 (mutant) - rat<br />
[[4kw6]], [[4fh8]] – Prx 1 – ''Ancylostoma ceylanicum''<br />
 
===Peroxiredoxin 2===
 
[[1tp9]] – Prx  II – ''Populus trichocarpa''<br />
[[2pwj]] – Prx II – garden pea<br />
[[4dsq]], [[4dsr]], [[4h86]] – yPrx II<br />
[[4dss]] – yPrx II (mutant) + thioredoxin II<br />
 
===Peroxiredoxin 3===
 
[[1zye]] – Prx III (mutant) – bovine<br />
 
===Peroxiredoxin 4===
 
[[3tjf]], [[3tjg]], [[3tjj]], [[3tjk]], [[3tkr]] - hPrx 4 (mutant)<br />
[[3qpm]] – Prx 4 – ''Larimichtys crocea''<br />
[[2pn8]], [[3tjb]], [[3tkp]], [[3tkq]], [[3tks]]  – hPrx 4<br />
 
===Peroxiredoxin 5===
 
[[1urm]] – hPrx 5 (mutant) – human<br />
[[2vl2]], [[2vl3]], [[2vl9]], [[1h4o]], [[1hd2]], [[1oc3]]  – hPrx 5<br />
[[3mng]] – hPrx 5+DTT<br />
[[2wfc]] – lPrx 5 - lugworm<br />
[[2xhf]] – Prx 5 – ''Alvinella pompejana''<br />
 
===Peroxiredoxin 6===
 
[[2v2g]] – lPrx 6 <br />
[[2v32]], [[2v41]] – lPrx 6 (mutant)<br />
 


== References ==
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Alexander Berchansky, Michal Harel, Joel L. Sussman