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[[Image:2hyk.jpg|left|200px]]<br /><applet load="2hyk" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2hyk, resolution 1.300&Aring;" />
'''The crystal structure of an endo-beta-1,3-glucanase from alkaliphilic Nocardiopsis sp.strain F96'''<br />


==About this Structure==
==The crystal structure of an endo-beta-1,3-glucanase from alkaliphilic Nocardiopsis sp.strain F96==
2HYK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Nocardiopsis_sp. Nocardiopsis sp.] with <scene name='pdbligand=SO4:'>SO4</scene>, <scene name='pdbligand=CA:'>CA</scene>, <scene name='pdbligand=EOH:'>EOH</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Glucan_endo-1,3-beta-D-glucosidase Glucan endo-1,3-beta-D-glucosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.39 3.2.1.39] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HYK OCA].  
<StructureSection load='2hyk' size='340' side='right'caption='[[2hyk]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2hyk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nocardiopsis_sp._F96 Nocardiopsis sp. F96]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HYK FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hyk OCA], [https://pdbe.org/2hyk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hyk RCSB], [https://www.ebi.ac.uk/pdbsum/2hyk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hyk ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q2V0H0_9ACTN Q2V0H0_9ACTN]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hy/2hyk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hyk ConSurf].
<div style="clear:both"></div>


==Reference==
==See Also==
The 1.3 A crystal structure of a novel endo-beta-1,3-glucanase of glycoside hydrolase family 16 from alkaliphilic Nocardiopsis sp. strain F96., Fibriansah G, Masuda S, Koizumi N, Nakamura S, Kumasaka T, Proteins. 2007 Nov 15;69(3):683-90. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17879342 17879342]
*[[Glucanase 3D structures|Glucanase 3D structures]]
[[Category: Glucan endo-1,3-beta-D-glucosidase]]
__TOC__
[[Category: Nocardiopsis sp.]]
</StructureSection>
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Fibriansah, G.]]
[[Category: Nocardiopsis sp. F96]]
[[Category: Kumasaka, T.]]
[[Category: Fibriansah G]]
[[Category: Nakamura, S.]]
[[Category: Kumasaka T]]
[[Category: CA]]
[[Category: Nakamura S]]
[[Category: EOH]]
[[Category: GOL]]
[[Category: SO4]]
[[Category: 3-glucanase]]
[[Category: bacterial endo-beta-1]]
[[Category: beta-jelly roll]]
[[Category: family 16]]
[[Category: hydrolase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:47:09 2008''

Latest revision as of 16:52, 13 March 2024

The crystal structure of an endo-beta-1,3-glucanase from alkaliphilic Nocardiopsis sp.strain F96The crystal structure of an endo-beta-1,3-glucanase from alkaliphilic Nocardiopsis sp.strain F96

Structural highlights

2hyk is a 1 chain structure with sequence from Nocardiopsis sp. F96. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.3Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q2V0H0_9ACTN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2hyk, resolution 1.30Å

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