2gk4: Difference between revisions

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[[Image:2gk4.gif|left|200px]]<br /><applet load="2gk4" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2gk4, resolution 1.83&Aring;" />
'''The Crystal Structure of the DNA/Pantothenate Metabolism Flavoprotein from Streptococcus pneumoniae'''<br />


==About this Structure==
==The Crystal Structure of the DNA/Pantothenate Metabolism Flavoprotein from Streptococcus pneumoniae==
2GK4 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tigr4 Streptococcus pneumoniae tigr4] with <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GK4 OCA].  
<StructureSection load='2gk4' size='340' side='right'caption='[[2gk4]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Streptococcus pneumoniae tigr4]]
<table><tr><td colspan='2'>[[2gk4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GK4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GK4 FirstGlance]. <br>
[[Category: Abdullah, J.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
[[Category: Joachimiak, A.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Kim, Y.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gk4 OCA], [https://pdbe.org/2gk4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gk4 RCSB], [https://www.ebi.ac.uk/pdbsum/2gk4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gk4 ProSAT], [https://www.topsan.org/Proteins/MCSG/2gk4 TOPSAN]</span></td></tr>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</table>
[[Category: Zhou, M.]]
== Function ==
[[Category: GOL]]
[https://www.uniprot.org/uniprot/A0A0H2UQ78_STRPN A0A0H2UQ78_STRPN]  
[[Category: alpha-beta-alpha sandwich]]
== Evolutionary Conservation ==
[[Category: flavoprotein]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: mcsg]]
Check<jmol>
[[Category: midwest center for structural genomics]]
  <jmolCheckbox>
[[Category: protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gk/2gk4_consurf.spt"</scriptWhenChecked>
[[Category: psi]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:32:32 2008''
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gk4 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus pneumoniae TIGR4]]
[[Category: Abdullah J]]
[[Category: Joachimiak A]]
[[Category: Kim Y]]
[[Category: Zhou M]]

Latest revision as of 11:04, 30 October 2024

The Crystal Structure of the DNA/Pantothenate Metabolism Flavoprotein from Streptococcus pneumoniaeThe Crystal Structure of the DNA/Pantothenate Metabolism Flavoprotein from Streptococcus pneumoniae

Structural highlights

2gk4 is a 2 chain structure with sequence from Streptococcus pneumoniae TIGR4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.83Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A0A0H2UQ78_STRPN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2gk4, resolution 1.83Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA