Sandbox Reserved 5: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Eric Martz, Student

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 <!-- INSERT YOUR SCENES AND TEXT BELOW THIS LINE -->
- <Structure load='2KT0' size='450' frame='true' align='right' caption='Insert caption here' scene='Insert optional scene name here' />
-#this shows charged area in Nanog. Blue one is negative charge, and red one is positive charge.<scene name='Sandbox_Reserved_5/Nanog_charge/1'>charged view</scene>
+== This page is about 4QA4. ==
-#Nanog has 3 alpha helix structure.<scene name='Sandbox_Reserved_5/Helix/1'>alpha-helix area</scene>
+<Structure load='4qa4' size='350' frame='true' align='right' caption='Insert caption here' scene='Insert optional scene name here' />
-#many part of nanog is highly conserved.<scene name='Sandbox_Reserved_5/Evolutionary_conservation/1'>evolutionary conserved area</scene>
+This protein is the Histone deacetylase.
+*The surface of 4QA4 that interacts histones. Histones are positively charged.Therefore 4QA4 <scene name='54/545854/Charge/1'>has negative charges.</scene> (<font color="blue">positive charges are blue</font>, <font color="red">negative charges are red</font>).
+*<scene name='54/545854/Ligands/1'>The secondary structure of 4QA4. </scene>
+(<font color="pink">alpha helices are pink</font>, <font color="green">beta strands are right green</font>, <font color="yellow"> 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide (B3N) and Zinc ion (ZN) are yellow</font>, <font color="blue"> Potassium ion  (K) are blue</font>, <font color="orange">Glycerol(GOL) are orange</font>. Right green, yellow, blue and orange colors are ligands.)