3lv4: Difference between revisions

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{{STRUCTURE_3lv4|  PDB=3lv4  |  SCENE=  }}
===Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.===


==About this Structure==
==Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.==
[[3lv4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_licheniformis Bacillus licheniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV4 OCA].  
<StructureSection load='3lv4' size='340' side='right'caption='[[3lv4]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
[[Category: Bacillus licheniformis]]
== Structural highlights ==
[[Category: Abashidze, M.]]
<table><tr><td colspan='2'>[[3lv4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_licheniformis_DSM_13_=_ATCC_14580 Bacillus licheniformis DSM 13 = ATCC 14580]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LV4 FirstGlance]. <br>
[[Category: Acton, T B.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.695&#8491;</td></tr>
[[Category: Belote, RL.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Ciccosanti, C.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lv4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv4 OCA], [https://pdbe.org/3lv4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lv4 RCSB], [https://www.ebi.ac.uk/pdbsum/3lv4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lv4 ProSAT]</span></td></tr>
[[Category: Everett, J K.]]
</table>
[[Category: Hunt, J F.]]
== Function ==
[[Category: Montelione, G T.]]
[https://www.uniprot.org/uniprot/Q65D31_BACLD Q65D31_BACLD]  
[[Category: NESG, Northeast Structural Genomics Consortium.]]
== Evolutionary Conservation ==
[[Category: Sahdev, S.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Seetharaman, J.]]
Check<jmol>
[[Category: Tong, L.]]
  <jmolCheckbox>
[[Category: Vorobiev, S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lv/3lv4_consurf.spt"</scriptWhenChecked>
[[Category: Xiao, R.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: 5-alpha-l-arabinosidase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Glycoside hydrolase]]
  </jmolCheckbox>
[[Category: Hydrolase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lv4 ConSurf].
[[Category: Nesg]]
<div style="clear:both"></div>
[[Category: Northeast structural genomics consortium]]
__TOC__
[[Category: Protein structure initiative]]
</StructureSection>
[[Category: Psi-2]]
[[Category: Bacillus licheniformis DSM 13 = ATCC 14580]]
[[Category: Similar to arabinan endo-1]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Abashidze M]]
[[Category: Acton TB]]
[[Category: Belote RL]]
[[Category: Ciccosanti C]]
[[Category: Everett JK]]
[[Category: Hunt JF]]
[[Category: Montelione GT]]
[[Category: Sahdev S]]
[[Category: Seetharaman J]]
[[Category: Tong L]]
[[Category: Vorobiev S]]
[[Category: Xiao R]]

Latest revision as of 12:24, 30 October 2024

Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.

Structural highlights

3lv4 is a 2 chain structure with sequence from Bacillus licheniformis DSM 13 = ATCC 14580. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.695Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q65D31_BACLD

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3lv4, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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