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[[Image:2ebj.jpg|left|200px]]<br /><applet load="2ebj" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2ebj, resolution 1.90&Aring;" />
'''Crystal structure of pyrrolidone carboxyl peptidase from Thermus thermophilus'''<br />


==About this Structure==
==Crystal structure of pyrrolidone carboxyl peptidase from Thermus thermophilus==
2EBJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Active as [http://en.wikipedia.org/wiki/Pyroglutamyl-peptidase_I Pyroglutamyl-peptidase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.19.3 3.4.19.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBJ OCA].
<StructureSection load='2ebj' size='340' side='right'caption='[[2ebj]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Pyroglutamyl-peptidase I]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2ebj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EBJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EBJ FirstGlance]. <br>
[[Category: Thermus thermophilus]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: Agari, Y.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ebj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ebj OCA], [https://pdbe.org/2ebj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ebj RCSB], [https://www.ebi.ac.uk/pdbsum/2ebj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ebj ProSAT], [https://www.topsan.org/Proteins/RSGI/2ebj TOPSAN]</span></td></tr>
[[Category: Karthe, P.]]
</table>
[[Category: Kumarevel, T S.]]
== Function ==
[[Category: Kuramitsu, S.]]
[https://www.uniprot.org/uniprot/Q5SJW4_THET8 Q5SJW4_THET8] Removes 5-oxoproline from various penultimate amino acid residues except L-proline (By similarity).[SAAS:SAAS016125_004_005679]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
== Evolutionary Conservation ==
[[Category: Yokoyama, S.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: degradation of proteins and peptides]]
Check<jmol>
[[Category: hydrolase]]
  <jmolCheckbox>
[[Category: national project on protein structural and functional analyses]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eb/2ebj_consurf.spt"</scriptWhenChecked>
[[Category: nppsfa]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: pyrrolidone carboxyl peptidase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: riken structural genomics/proteomics initiative]]
  </jmolCheckbox>
[[Category: rsgi]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ebj ConSurf].
[[Category: structural genomics]]
<div style="clear:both"></div>
[[Category: thermus thermophilus]]
__TOC__
[[Category: ttha0888]]
</StructureSection>
 
[[Category: Large Structures]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:08:21 2008''
[[Category: Thermus thermophilus HB8]]
[[Category: Agari Y]]
[[Category: Karthe P]]
[[Category: Kumarevel TS]]
[[Category: Kuramitsu S]]
[[Category: Yokoyama S]]

Latest revision as of 11:38, 25 October 2023

Crystal structure of pyrrolidone carboxyl peptidase from Thermus thermophilusCrystal structure of pyrrolidone carboxyl peptidase from Thermus thermophilus

Structural highlights

2ebj is a 2 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SJW4_THET8 Removes 5-oxoproline from various penultimate amino acid residues except L-proline (By similarity).[SAAS:SAAS016125_004_005679]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2ebj, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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