3gp4: Difference between revisions

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-[[Image:3gp4.png|left|200px]]
-{{STRUCTURE_3gp4|  PDB=3gp4  |  SCENE=  }}
+==Crystal structure of putative MerR family transcriptional regulator from listeria monocytogenes==
+<StructureSection load='3gp4' size='340' side='right'caption='[[3gp4]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-===Crystal structure of putative MerR family transcriptional regulator from listeria monocytogenes===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3gp4]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_serotype_4b_str._F2365 Listeria monocytogenes serotype 4b str. F2365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GP4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GP4 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MED:D-METHIONINE'>MED</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-[[3gp4]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes_serotype_4b_str._f2365 Listeria monocytogenes serotype 4b str. f2365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GP4 OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gp4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gp4 OCA], [https://pdbe.org/3gp4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gp4 RCSB], [https://www.ebi.ac.uk/pdbsum/3gp4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gp4 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gp4 TOPSAN]</span></td></tr>
-[[Category: Listeria monocytogenes serotype 4b str. f2365]]
+</table>
-[[Category: Almo, S C.]]
+== Evolutionary Conservation ==
-[[Category: Burley, S K.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Morano, C.]]
+Check<jmol>
-[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+  <jmolCheckbox>
-[[Category: Ramagopal, U A.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gp/3gp4_consurf.spt"</scriptWhenChecked>
-[[Category: Toro, R.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Dna-binding]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Merr]]
+  </jmolCheckbox>
-[[Category: New york sgx research center for structural genomic]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gp4 ConSurf].
-[[Category: Nysgxrc]]
+<div style="clear:both"></div>
-[[Category: Protein structure initiative]]
+__TOC__
-[[Category: Psi-2]]
+</StructureSection>
-[[Category: Structural genomic]]
+[[Category: Large Structures]]
-[[Category: Transcription regulator]]
+[[Category: Listeria monocytogenes serotype 4b str. F2365]]
-[[Category: Transcriptional regulator]]
+[[Category: Almo SC]]
+[[Category: Burley SK]]
+[[Category: Morano C]]
+[[Category: Ramagopal UA]]
+[[Category: Toro R]]