3fdi: Difference between revisions

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-[[Image:3fdi.png|left|200px]]
-{{STRUCTURE_3fdi|  PDB=3fdi  |  SCENE=  }}
+==Crystal structure of uncharacterized protein from Eubacterium ventriosum ATCC 27560.==
+<StructureSection load='3fdi' size='340' side='right'caption='[[3fdi]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-===Crystal structure of uncharacterized protein from Eubacterium ventriosum ATCC 27560.===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3fdi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Eubacterium_ventriosum_ATCC_27560 Eubacterium ventriosum ATCC 27560]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FDI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FDI FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[3fdi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Eubacterium_ventriosum Eubacterium ventriosum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FDI OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fdi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fdi OCA], [https://pdbe.org/3fdi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fdi RCSB], [https://www.ebi.ac.uk/pdbsum/3fdi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fdi ProSAT], [https://www.topsan.org/Proteins/MCSG/3fdi TOPSAN]</span></td></tr>
-[[Category: Eubacterium ventriosum]]
+</table>
-[[Category: Jedrzejczak, R.]]
+== Evolutionary Conservation ==
-[[Category: Joachimiak, A.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Keigher, L.]]
+Check<jmol>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+  <jmolCheckbox>
-[[Category: Nocek, B.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fd/3fdi_consurf.spt"</scriptWhenChecked>
-[[Category: Cytidylate kinase like protein]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Mcsg]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Midwest center for structural genomic]]
+  </jmolCheckbox>
-[[Category: Prk04182 class member]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fdi ConSurf].
-[[Category: Protein structure initiative]]
+<div style="clear:both"></div>
-[[Category: Psi]]
+__TOC__
-[[Category: Structural genomic]]
+</StructureSection>
-[[Category: Unknown function]]
+[[Category: Eubacterium ventriosum ATCC 27560]]
+[[Category: Large Structures]]
+[[Category: Jedrzejczak R]]
+[[Category: Joachimiak A]]
+[[Category: Keigher L]]
+[[Category: Nocek B]]