3ey7: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3ey7.png|left|200px]]


{{STRUCTURE_3ey7|  PDB=3ey7  |  SCENE=  }}
==Structure from the mobile metagenome of V. Cholerae. Integron cassette protein VCH_CASS1==
 
<StructureSection load='3ey7' size='340' side='right'caption='[[3ey7]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
===Structure from the mobile metagenome of V. Cholerae. Integron cassette protein VCH_CASS1===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3ey7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EY7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EY7 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[3ey7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EY7 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ey7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ey7 OCA], [https://pdbe.org/3ey7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ey7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ey7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ey7 ProSAT], [https://www.topsan.org/Proteins/MCSG/3ey7 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9K3D3_VIBCH Q9K3D3_VIBCH]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ey/3ey7_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ey7 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Vibrio cholerae]]
[[Category: Vibrio cholerae]]
[[Category: Boucher, Y.]]
[[Category: Boucher Y]]
[[Category: Chang, C.]]
[[Category: Chang C]]
[[Category: Cui, H.]]
[[Category: Cui H]]
[[Category: Curmi, P M.G.]]
[[Category: Curmi PMG]]
[[Category: Deshpande, C N.]]
[[Category: Deshpande CN]]
[[Category: Edwards, A.]]
[[Category: Edwards A]]
[[Category: Harrop, S J.]]
[[Category: Harrop SJ]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Mabbutt BC]]
[[Category: Mabbutt, B C.]]
[[Category: Savchenko A]]
[[Category: Savchenko, A.]]
[[Category: Sureshan V]]
[[Category: Sureshan, V.]]
[[Category: Xu X]]
[[Category: Xu, X.]]
[[Category: Dioxygenase]]
[[Category: Integron cassette protein mobile metagenome structural genomic]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Oxidoreductase]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]

Latest revision as of 12:05, 30 October 2024

Structure from the mobile metagenome of V. Cholerae. Integron cassette protein VCH_CASS1Structure from the mobile metagenome of V. Cholerae. Integron cassette protein VCH_CASS1

Structural highlights

3ey7 is a 2 chain structure with sequence from Vibrio cholerae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9K3D3_VIBCH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3ey7, resolution 1.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3ey7&oldid=4206669"