1vki: Difference between revisions

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[[Image:1vki.png|left|200px]]


{{STRUCTURE_1vki|  PDB=1vki  |  SCENE=  }}
==Crystal structure of a putative oligo-nucleotide binding protein (atu3699, agr_l_2275) from agrobacterium tumefaciens str. c58 at 1.60 A resolution==
 
<StructureSection load='1vki' size='340' side='right'caption='[[1vki]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
===Crystal structure of a putative oligo-nucleotide binding protein (atu3699, agr_l_2275) from agrobacterium tumefaciens str. c58 at 1.60 A resolution===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1vki]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VKI FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[1vki]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKI OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vki OCA], [https://pdbe.org/1vki PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vki RCSB], [https://www.ebi.ac.uk/pdbsum/1vki PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vki ProSAT], [https://www.topsan.org/Proteins/JCSG/1vki TOPSAN]</span></td></tr>
[[Category: Agrobacterium tumefaciens str. c58]]
</table>
[[Category: JCSG, Joint Center for Structural Genomics.]]
== Function ==
[[Category: Jcsg]]
[https://www.uniprot.org/uniprot/A9CFJ8_AGRFC A9CFJ8_AGRFC]  
[[Category: Joint center for structural genomic]]
== Evolutionary Conservation ==
[[Category: Protein structure initiative]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Psi]]
Check<jmol>
[[Category: Structural genomic]]
  <jmolCheckbox>
[[Category: Translation]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vk/1vki_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vki ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Large Structures]]

Latest revision as of 17:53, 20 September 2023

Crystal structure of a putative oligo-nucleotide binding protein (atu3699, agr_l_2275) from agrobacterium tumefaciens str. c58 at 1.60 A resolutionCrystal structure of a putative oligo-nucleotide binding protein (atu3699, agr_l_2275) from agrobacterium tumefaciens str. c58 at 1.60 A resolution

Structural highlights

1vki is a 2 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.6Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A9CFJ8_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1vki, resolution 1.60Å

Drag the structure with the mouse to rotate

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OCA