4ar4: Difference between revisions

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-[[Image:4ar4.jpg|left|200px]]
-{{STRUCTURE_4ar4|  PDB=4ar4  |  SCENE=  }}
+==Neutron crystallographic structure of the reduced form perdeuterated Pyrococcus furiosus rubredoxin to 1.38 Angstrom resolution.==
+<StructureSection load='4ar4' size='340' side='right'caption='[[4ar4]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[4ar4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AR4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AR4 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Neutron Diffraction, [[Resolution|Resolution]] 1.381&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=D3O:TRIDEUTERIOOXIDANIUM'>D3O</scene>, <scene name='pdbligand=D8U:DEUTERIUM(1+)'>D8U</scene>, <scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ar4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ar4 OCA], [https://pdbe.org/4ar4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ar4 RCSB], [https://www.ebi.ac.uk/pdbsum/4ar4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ar4 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RUBR_PYRFU RUBR_PYRFU] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+Neutron crystallographic analyses at near-atomic resolution are presented for both reduced and oxidized forms of perdeuterated Pyrococcus furiosus rubredoxin, a small iron-sulfur redox protein with remarkable thermostability. Hydronium ions may play a key role in the protonation and charge-transfer processes associated with the oxidized and reduced forms of the protein. Picture: overall structure showing D(3) O(+) ions (red and gray molecules).
-===Neutron crystallographic structure of the reduced form perdeuterated Pyrococcus furiosus rubredoxin to 1.38 Angstoms resolution.===
+Near-Atomic Resolution Neutron Crystallography on Perdeuterated Pyrococcus furiosus Rubredoxin: Implication of Hydronium Ions and Protonation State Equilibria in Redox Changes.,Cuypers MG, Mason SA, Blakeley MP, Mitchell EP, Haertlein M, Forsyth VT Angew Chem Int Ed Engl. 2013 Jan 14;52(3):1022-5. doi: 10.1002/anie.201207071., Epub 2012 Dec 6. PMID:23225503<ref>PMID:23225503</ref>
-{{ABSTRACT_PUBMED_23225503}}
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
+</div>
+<div class="pdbe-citations 4ar4" style="background-color:#fffaf0;"></div>
-==About this Structure==
+==See Also==
-[[4ar4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AR4 OCA].
+*[[Rubredoxin 3D structures|Rubredoxin 3D structures]]
-[[Category: Pyrococcus furiosus]]
+*[[Rubredoxin PDB structures|Rubredoxin PDB structures]]
-[[Category: Blakeley, M P.]]
+== References ==
-[[Category: Cuypers, M G.]]
+<references/>
-[[Category: Forsyth, V T.]]
+__TOC__
-[[Category: Haertlein, M.]]
+</StructureSection>
-[[Category: Mason, S A.]]
+[[Category: Large Structures]]
-[[Category: Mitchell, E P.]]
+[[Category: Pyrococcus furiosus DSM 3638]]
-[[Category: Electron transport]]
+[[Category: Blakeley MP]]
-[[Category: Hydronium]]
+[[Category: Cuypers MG]]
-[[Category: Monochromatic neutron crystallography]]
+[[Category: Forsyth VT]]
-[[Category: Perdeuterated]]
+[[Category: Haertlein M]]
-[[Category: Protonation state]]
+[[Category: Mason SA]]
+[[Category: Mitchell EP]]