3dv9: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3dv9.png|left|200px]]


{{STRUCTURE_3dv9| PDB=3dv9 | SCENE= }}
==Putative beta-phosphoglucomutase from Bacteroides vulgatus.==
<StructureSection load='3dv9' size='340' side='right'caption='[[3dv9]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3dv9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phocaeicola_vulgatus_ATCC_8482 Phocaeicola vulgatus ATCC 8482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DV9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DV9 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dv9 OCA], [https://pdbe.org/3dv9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dv9 RCSB], [https://www.ebi.ac.uk/pdbsum/3dv9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dv9 ProSAT], [https://www.topsan.org/Proteins/MCSG/3dv9 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A6L7P8_PHOV8 A6L7P8_PHOV8]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dv/3dv9_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dv9 ConSurf].
<div style="clear:both"></div>


===Putative beta-phosphoglucomutase from Bacteroides vulgatus.===
==See Also==
 
*[[Beta-phosphoglucomutase 3D structures|Beta-phosphoglucomutase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
[[3dv9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_vulgatus Bacteroides vulgatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DV9 OCA].
[[Category: Large Structures]]
[[Category: Bacteroides vulgatus]]
[[Category: Phocaeicola vulgatus ATCC 8482]]
[[Category: Clancy, S.]]
[[Category: Clancy S]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Osipiuk J]]
[[Category: Osipiuk, J.]]
[[Category: Tesar C]]
[[Category: Tesar, C.]]
[[Category: Apc60149]]
[[Category: Beta-phosphoglucomutase]]
[[Category: Isomerase]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]

Latest revision as of 12:48, 6 November 2024

Putative beta-phosphoglucomutase from Bacteroides vulgatus.Putative beta-phosphoglucomutase from Bacteroides vulgatus.

Structural highlights

3dv9 is a 1 chain structure with sequence from Phocaeicola vulgatus ATCC 8482. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.72Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A6L7P8_PHOV8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3dv9, resolution 1.72Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA