3e7n: Difference between revisions

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[[Image:3e7n.png|left|200px]]


{{STRUCTURE_3e7n|  PDB=3e7n  |  SCENE=  }}
==Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2==
 
<StructureSection load='3e7n' size='340' side='right'caption='[[3e7n]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
===Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3e7n]] is a 15 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3dsa 3dsa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E7N OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=3E7N FirstGlance]. <br>
 
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
==About this Structure==
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[3e7n]] is a 15 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3dsa 3dsa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E7N OCA].  
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dsa|3dsa]]</td></tr>
[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=3e7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e7n OCA], [http://pdbe.org/3e7n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3e7n RCSB], [http://www.ebi.ac.uk/pdbsum/3e7n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3e7n ProSAT], [http://www.topsan.org/Proteins/CSGID/3e7n TOPSAN]</span></td></tr>
[[Category: Anderson, W.]]
</table>
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
== Function ==
[[Category: Gu, M.]]
[[http://www.uniprot.org/uniprot/RBSD_SALTY RBSD_SALTY]] Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.[HAMAP-Rule:MF_01661]
[[Category: Joachimiak, A.]]
== Evolutionary Conservation ==
[[Category: Maltseva, N.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Nocek, B.]]
Check<jmol>
[[Category: Center for structural genomics of infectious disease]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e7/3e7n_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e7n ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Anderson, W]]
[[Category: Structural genomic]]
[[Category: Gu, M]]
[[Category: Joachimiak, A]]
[[Category: Maltseva, N]]
[[Category: Nocek, B]]
[[Category: Csgid]]
[[Category: Csgid]]
[[Category: D-ribose transport system]]
[[Category: D-ribose transport system]]
[[Category: Niaid structural genomics centers for infectious disease]]
[[Category: Rbsd]]
[[Category: Rbsd]]
[[Category: Structural genomic]]
[[Category: Transport protein]]
[[Category: Transport protein]]

Latest revision as of 13:20, 9 September 2020

Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2Crystal structure of d-ribose high-affinity transport system from salmonella typhimurium lt2

Structural highlights

3e7n is a 15 chain structure. This structure supersedes the now removed PDB entry 3dsa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[RBSD_SALTY] Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.[HAMAP-Rule:MF_01661]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3e7n, resolution 2.45Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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