3dxx: Difference between revisions

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[[Image:3dxx.png|left|200px]]


{{STRUCTURE_3dxx| PDB=3dxx | SCENE= }}
==Crystal structure of EcTrmB==
<StructureSection load='3dxx' size='340' side='right'caption='[[3dxx]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3dxx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DXX FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dxx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dxx OCA], [https://pdbe.org/3dxx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dxx RCSB], [https://www.ebi.ac.uk/pdbsum/3dxx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dxx ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TRMB_ECOLI TRMB_ECOLI] Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/3dxx_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dxx ConSurf].
<div style="clear:both"></div>


===Crystal structure of EcTrmB===
==See Also==
 
*[[Actin-related protein 3D structures|Actin-related protein 3D structures]]
 
*[[TRNA methyltransferase 3D structures|TRNA methyltransferase 3D structures]]
==About this Structure==
__TOC__
[[3dxx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXX OCA].
</StructureSection>
 
[[Category: Escherichia coli K-12]]
==Reference==
[[Category: Large Structures]]
<ref group="xtra">PMID:019373903</ref><references group="xtra"/>
[[Category: Gao YX]]
[[Category: Escherichia coli]]
[[Category: Liu Q]]
[[Category: Gao, Y X.]]
[[Category: Niu LW]]
[[Category: Liu, Q.]]
[[Category: Teng MK]]
[[Category: Niu, L W.]]
[[Category: Zhou HH]]
[[Category: Teng, M K.]]
[[Category: Zhou, H H.]]
[[Category: Methyltransferase]]
[[Category: Rossmann fold methyltransferase]]
[[Category: S-adenosyl-l-methionine]]
[[Category: Transferase]]
[[Category: Trna modification]]
[[Category: Trna processing]]

Latest revision as of 11:24, 20 March 2024

Crystal structure of EcTrmBCrystal structure of EcTrmB

Structural highlights

3dxx is a 1 chain structure with sequence from Escherichia coli K-12. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

TRMB_ECOLI Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3dxx, resolution 2.05Å

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