3dxx: Difference between revisions

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-[[Image:3dxx.png|left|200px]]
-{{STRUCTURE_3dxx|  PDB=3dxx  |  SCENE=  }}
+==Crystal structure of EcTrmB==
+<StructureSection load='3dxx' size='340' side='right'caption='[[3dxx]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3dxx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DXX FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dxx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dxx OCA], [https://pdbe.org/3dxx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dxx RCSB], [https://www.ebi.ac.uk/pdbsum/3dxx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dxx ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/TRMB_ECOLI TRMB_ECOLI] Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/3dxx_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dxx ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of EcTrmB===
+==See Also==
+*[[Actin-related protein 3D structures|Actin-related protein 3D structures]]
+*[[TRNA methyltransferase 3D structures|TRNA methyltransferase 3D structures]]
-==About this Structure==
+__TOC__
-[[3dxx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXX OCA].
+</StructureSection>
+[[Category: Escherichia coli K-12]]
-==Reference==
+[[Category: Large Structures]]
-<ref group="xtra">PMID:019373903</ref><references group="xtra"/>
+[[Category: Gao YX]]
-[[Category: Escherichia coli]]
+[[Category: Liu Q]]
-[[Category: Gao, Y X.]]
+[[Category: Niu LW]]
-[[Category: Liu, Q.]]
+[[Category: Teng MK]]
-[[Category: Niu, L W.]]
+[[Category: Zhou HH]]
-[[Category: Teng, M K.]]
-[[Category: Zhou, H H.]]
-[[Category: Methyltransferase]]
-[[Category: Rossmann fold methyltransferase]]
-[[Category: S-adenosyl-l-methionine]]
-[[Category: Transferase]]
-[[Category: Trna modification]]
-[[Category: Trna processing]]