3cdd: Difference between revisions

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[[Image:3cdd.png|left|200px]]


{{STRUCTURE_3cdd|  PDB=3cdd  |  SCENE=  }}
==Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis==
 
<StructureSection load='3cdd' size='340' side='right'caption='[[3cdd]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
===Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3cdd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Sheon Sheon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CDD FirstGlance]. <br>
 
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
==About this Structure==
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SO_2699 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=211586 SHEON])</td></tr>
[[3cdd]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Shewanella_oneidensis_mr-1 Shewanella oneidensis mr-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDD OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cdd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cdd OCA], [https://pdbe.org/3cdd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cdd RCSB], [https://www.ebi.ac.uk/pdbsum/3cdd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cdd ProSAT], [https://www.topsan.org/Proteins/MCSG/3cdd TOPSAN]</span></td></tr>
[[Category: Shewanella oneidensis mr-1]]
</table>
[[Category: Chang, C.]]
== Evolutionary Conservation ==
[[Category: Edwards, A M.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Evdokimova, E.]]
Check<jmol>
[[Category: Joachimiak, A.]]
  <jmolCheckbox>
[[Category: Kudritska, M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/3cdd_consurf.spt"</scriptWhenChecked>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Savchenko, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cdd ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Sheon]]
[[Category: Chang, C]]
[[Category: Edwards, A M]]
[[Category: Evdokimova, E]]
[[Category: Joachimiak, A]]
[[Category: Kudritska, M]]
[[Category: Structural genomic]]
[[Category: Savchenko, A]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Muso2]]
[[Category: Muso2]]
[[Category: Protein structure initiative]]
[[Category: PSI, Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Shewanella oneidensis mr-1]]
[[Category: Shewanella oneidensis mr-1]]
[[Category: Structural genomic]]
[[Category: Structural protein]]
[[Category: Structural protein]]

Latest revision as of 10:51, 27 January 2022

Crystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensisCrystal structure of prophage MuSo2, 43 kDa tail protein from Shewanella oneidensis

Structural highlights

3cdd is a 6 chain structure with sequence from Sheon. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:SO_2699 (SHEON)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3cdd, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA