3cbt: Difference between revisions

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[[Image:3cbt.png|left|200px]]


{{STRUCTURE_3cbt|  PDB=3cbt  |  SCENE=  }}
==Crystal structure of SC4828, a unique phosphatase from Streptomyces coelicolor==
 
<StructureSection load='3cbt' size='340' side='right'caption='[[3cbt]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
===Crystal structure of SC4828, a unique phosphatase from Streptomyces coelicolor===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3cbt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Strco Strco]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3bxt 3bxt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CBT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CBT FirstGlance]. <br>
 
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
==About this Structure==
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[3cbt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor_a3(2) Streptomyces coelicolor a3(2)]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3bxt 3bxt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CBT OCA].  
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SCO5041, SCK7.14, SCK7.14c, gi:21223414 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=100226 STRCO])</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/5'-nucleotidase 5'-nucleotidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.5 3.1.3.5] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cbt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cbt OCA], [https://pdbe.org/3cbt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cbt RCSB], [https://www.ebi.ac.uk/pdbsum/3cbt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cbt ProSAT], [https://www.topsan.org/Proteins/MCSG/3cbt TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cb/3cbt_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cbt ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: 5'-nucleotidase]]
[[Category: 5'-nucleotidase]]
[[Category: Chang, C.]]
[[Category: Large Structures]]
[[Category: Edwards, A M.]]
[[Category: Strco]]
[[Category: Joachimiak, A.]]
[[Category: Chang, C]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Edwards, A M]]
[[Category: Savchenko, A.]]
[[Category: Joachimiak, A]]
[[Category: Singer, A U.]]
[[Category: Structural genomic]]
[[Category: Xu, X.]]
[[Category: Savchenko, A]]
[[Category: Yakunin, A F.]]
[[Category: Singer, A U]]
[[Category: Zheng, H.]]
[[Category: Xu, X]]
[[Category: Yakunin, A F]]
[[Category: Zheng, H]]
[[Category: Duf402]]
[[Category: Duf402]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Streptomyces unusual phosphatase]]
[[Category: Streptomyces unusual phosphatase]]
[[Category: Structural genomic]]

Latest revision as of 10:50, 27 January 2022

Crystal structure of SC4828, a unique phosphatase from Streptomyces coelicolorCrystal structure of SC4828, a unique phosphatase from Streptomyces coelicolor

Structural highlights

3cbt is a 1 chain structure with sequence from Strco. This structure supersedes the now removed PDB entry 3bxt. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
NonStd Res:
Gene:SCO5041, SCK7.14, SCK7.14c, gi:21223414 (STRCO)
Activity:5'-nucleotidase, with EC number 3.1.3.5
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3cbt, resolution 1.70Å

Drag the structure with the mouse to rotate

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OCA
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