3dmn: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3dmn.png|left|200px]]


{{STRUCTURE_3dmn|  PDB=3dmn  |  SCENE=  }}
==The crystal structure of the C-terminal domain of a possilbe DNA helicase from Lactobacillus plantarun WCFS1==
 
<StructureSection load='3dmn' size='340' side='right'caption='[[3dmn]], [[Resolution|resolution]] 1.66&Aring;' scene=''>
===The crystal structure of the C-terminal domain of a possilbe DNA helicase from Lactobacillus plantarun WCFS1===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3dmn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum Lactiplantibacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DMN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DMN FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.66&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[3dmn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DMN OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dmn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dmn OCA], [https://pdbe.org/3dmn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dmn RCSB], [https://www.ebi.ac.uk/pdbsum/3dmn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dmn ProSAT], [https://www.topsan.org/Proteins/MCSG/3dmn TOPSAN]</span></td></tr>
[[Category: Lactobacillus plantarum]]
</table>
[[Category: Gu, M.]]
== Evolutionary Conservation ==
[[Category: Joachimiak, A.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
Check<jmol>
[[Category: Tan, K.]]
  <jmolCheckbox>
[[Category: Zhou, M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dm/3dmn_consurf.spt"</scriptWhenChecked>
[[Category: Apc89291 2]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Dna helicase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Helicase]]
  </jmolCheckbox>
[[Category: Lactobacillus plantarum wcfs1]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dmn ConSurf].
[[Category: Mcsg]]
<div style="clear:both"></div>
[[Category: Midwest center for structural genomic]]
__TOC__
[[Category: Protein structure initiative]]
</StructureSection>
[[Category: Psi-2]]
[[Category: Lactiplantibacillus plantarum]]
[[Category: Structural genomic]]
[[Category: Large Structures]]
[[Category: Unknown function]]
[[Category: Gu M]]
[[Category: Joachimiak A]]
[[Category: Tan K]]
[[Category: Zhou M]]

Latest revision as of 04:43, 21 November 2024

The crystal structure of the C-terminal domain of a possilbe DNA helicase from Lactobacillus plantarun WCFS1The crystal structure of the C-terminal domain of a possilbe DNA helicase from Lactobacillus plantarun WCFS1

Structural highlights

3dmn is a 1 chain structure with sequence from Lactiplantibacillus plantarum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.66Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dmn, resolution 1.66Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA