2iee: Difference between revisions

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[[Image:2iee.png|left|200px]]


{{STRUCTURE_2iee|  PDB=2iee  |  SCENE=  }}
==Crystal Structure of YCKB_BACSU from Bacillus subtilis. Northeast Structural Genomics Consortium target SR574.==
 
<StructureSection load='2iee' size='340' side='right'caption='[[2iee]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
===Crystal Structure of YCKB_BACSU from Bacillus subtilis. Northeast Structural Genomics Consortium target SR574.===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2iee]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IEE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IEE FirstGlance]. <br>
 
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
==About this Structure==
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yckB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
[[2iee]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IEE OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iee FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iee OCA], [https://pdbe.org/2iee PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iee RCSB], [https://www.ebi.ac.uk/pdbsum/2iee PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iee ProSAT], [https://www.topsan.org/Proteins/NESGC/2iee TOPSAN]</span></td></tr>
[[Category: Bacillus subtilis]]
</table>
[[Category: Acton, T B.]]
== Function ==
[[Category: Baran, M C.]]
[[https://www.uniprot.org/uniprot/YCKB_BACSU YCKB_BACSU]] Probably part of a binding-protein-dependent transport system.
[[Category: Chen, X C.]]
== Evolutionary Conservation ==
[[Category: Cunningham, K.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Hunt, J F.]]
Check<jmol>
[[Category: Jang, M.]]
  <jmolCheckbox>
[[Category: Jayaraman, S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ie/2iee_consurf.spt"</scriptWhenChecked>
[[Category: Kuzin, A P.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Liu, J.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Ma, C.]]
  </jmolCheckbox>
[[Category: Montelione, G T.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iee ConSurf].
[[Category: NESG, Northeast Structural Genomics Consortium.]]
<div style="clear:both"></div>
[[Category: Rost, B.]]
__TOC__
[[Category: Su, M.]]
</StructureSection>
[[Category: Tong, L.]]
[[Category: Bacillus globigii migula 1900]]
[[Category: Xiao, R.]]
[[Category: Large Structures]]
[[Category: Acton, T B]]
[[Category: Baran, M C]]
[[Category: Chen, X C]]
[[Category: Cunningham, K]]
[[Category: Hunt, J F]]
[[Category: Jang, M]]
[[Category: Jayaraman, S]]
[[Category: Kuzin, A P]]
[[Category: Liu, J]]
[[Category: Ma, C]]
[[Category: Montelione, G T]]
[[Category: Structural genomic]]
[[Category: Rost, B]]
[[Category: Su, M]]
[[Category: Tong, L]]
[[Category: Xiao, R]]
[[Category: Nesg]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Sr574]]
[[Category: Sr574]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
[[Category: Unknown function]]
[[Category: Yckb]]
[[Category: Yckb]]

Latest revision as of 14:14, 31 March 2021

Crystal Structure of YCKB_BACSU from Bacillus subtilis. Northeast Structural Genomics Consortium target SR574.Crystal Structure of YCKB_BACSU from Bacillus subtilis. Northeast Structural Genomics Consortium target SR574.

Structural highlights

2iee is a 2 chain structure with sequence from "bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:yckB ("Bacillus globigii" Migula 1900)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[YCKB_BACSU] Probably part of a binding-protein-dependent transport system.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2iee, resolution 2.20Å

Drag the structure with the mouse to rotate

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