1wwk: Difference between revisions

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[[Image:1wwk.gif|left|200px]]<br /><applet load="1wwk" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1wwk, resolution 1.90&Aring;" />
'''Crystal structure of phosphoglycerate dehydrogenase from Pyrococcus horikoshii OT3'''<br />


==About this Structure==
==Crystal structure of phosphoglycerate dehydrogenase from Pyrococcus horikoshii OT3==
1WWK is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii] with <scene name='pdbligand=NAD:'>NAD</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Phosphoglycerate_dehydrogenase Phosphoglycerate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.95 1.1.1.95] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WWK OCA].
<StructureSection load='1wwk' size='340' side='right'caption='[[1wwk]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
[[Category: Phosphoglycerate dehydrogenase]]
== Structural highlights ==
[[Category: Pyrococcus horikoshii]]
<table><tr><td colspan='2'>[[1wwk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WWK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WWK FirstGlance]. <br>
[[Category: Single protein]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
[[Category: Kunishima, N.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wwk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wwk OCA], [https://pdbe.org/1wwk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wwk RCSB], [https://www.ebi.ac.uk/pdbsum/1wwk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wwk ProSAT], [https://www.topsan.org/Proteins/RSGI/1wwk TOPSAN]</span></td></tr>
[[Category: Sugahara, M.]]
</table>
[[Category: NAD]]
== Function ==
[[Category: phosphoglycerate dehydrogenase]]
[https://www.uniprot.org/uniprot/O50095_PYRHO O50095_PYRHO]  
[[Category: pyrococcus horikoshii]]
== Evolutionary Conservation ==
[[Category: riken structural genomics/proteomics initiative]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: rsgi]]
Check<jmol>
[[Category: structural genomics]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ww/1wwk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wwk ConSurf].
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:48:48 2008''
==See Also==
*[[Phosphoglycerate dehydrogenase|Phosphoglycerate dehydrogenase]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Kunishima N]]
[[Category: Sugahara M]]

Latest revision as of 16:34, 13 March 2024

Crystal structure of phosphoglycerate dehydrogenase from Pyrococcus horikoshii OT3Crystal structure of phosphoglycerate dehydrogenase from Pyrococcus horikoshii OT3

Structural highlights

1wwk is a 2 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O50095_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1wwk, resolution 1.90Å

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OCA