2g9d: Difference between revisions

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[[Image:2g9d.png|left|200px]]


{{STRUCTURE_2g9d|  PDB=2g9d  |  SCENE=  }}
==Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20==
 
<StructureSection load='2g9d' size='340' side='right'caption='[[2g9d]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
===Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2g9d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_MO10 Vibrio cholerae MO10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G9D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G9D FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[2g9d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G9D OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g9d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g9d OCA], [https://pdbe.org/2g9d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g9d RCSB], [https://www.ebi.ac.uk/pdbsum/2g9d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g9d ProSAT], [https://www.topsan.org/Proteins/NESGC/2g9d TOPSAN]</span></td></tr>
[[Category: Vibrio cholerae]]
</table>
[[Category: Acton, T B.]]
== Function ==
[[Category: Conover, K.]]
[https://www.uniprot.org/uniprot/ASTE_VIBCH ASTE_VIBCH] Transforms N(2)-succinylglutamate into succinate and glutamate (By similarity).
[[Category: Forouhar, F.]]
== Evolutionary Conservation ==
[[Category: Hunt, J F.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Jayaraman, S.]]
Check<jmol>
[[Category: Montelione, G T.]]
  <jmolCheckbox>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g9/2g9d_consurf.spt"</scriptWhenChecked>
[[Category: Rong, X.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Tong, L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Zhou, W.]]
  </jmolCheckbox>
[[Category: Alpha-beta protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g9d ConSurf].
[[Category: Hydrolase]]
<div style="clear:both"></div>
[[Category: Nesg]]
__TOC__
[[Category: Northeast structural genomics consortium]]
</StructureSection>
[[Category: Protein structure initiative]]
[[Category: Large Structures]]
[[Category: Psi]]
[[Category: Vibrio cholerae MO10]]
[[Category: Structural genomic]]
[[Category: Acton TB]]
[[Category: Conover K]]
[[Category: Forouhar F]]
[[Category: Hunt JF]]
[[Category: Jayaraman S]]
[[Category: Montelione GT]]
[[Category: Rong X]]
[[Category: Tong L]]
[[Category: Zhou W]]

Latest revision as of 11:02, 30 October 2024

Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20Crystal Structure of Succinylglutamate desuccinylase from Vibrio cholerae, Northeast Structural Genomics Target VcR20

Structural highlights

2g9d is a 1 chain structure with sequence from Vibrio cholerae MO10. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

ASTE_VIBCH Transforms N(2)-succinylglutamate into succinate and glutamate (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2g9d, resolution 3.00Å

Drag the structure with the mouse to rotate

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OCA