2ibd: Difference between revisions

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[[Image:2ibd.png|left|200px]]


{{STRUCTURE_2ibd|  PDB=2ibd  |  SCENE=  }}
==Crystal structure of Probable transcriptional regulatory protein RHA5900==
 
<StructureSection load='2ibd' size='340' side='right'caption='[[2ibd]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
===Crystal structure of Probable transcriptional regulatory protein RHA5900===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2ibd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_jostii_RHA1 Rhodococcus jostii RHA1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IBD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IBD FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[2ibd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodococcus_sp. Rhodococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IBD OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ibd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ibd OCA], [https://pdbe.org/2ibd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ibd RCSB], [https://www.ebi.ac.uk/pdbsum/2ibd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ibd ProSAT], [https://www.topsan.org/Proteins/MCSG/2ibd TOPSAN]</span></td></tr>
[[Category: Rhodococcus sp.]]
</table>
[[Category: Chang, C.]]
== Evolutionary Conservation ==
[[Category: Edwards, A M.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Evdokimova, E.]]
Check<jmol>
[[Category: Joachimiak, A.]]
  <jmolCheckbox>
[[Category: Kagan, O.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ib/2ibd_consurf.spt"</scriptWhenChecked>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Savchenko, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Mcsg]]
  </jmolCheckbox>
[[Category: Midwest center for structural genomic]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ibd ConSurf].
[[Category: Probable transcriptional regulatory protein]]
<div style="clear:both"></div>
[[Category: Protein structure initiative]]
__TOC__
[[Category: Psi-2]]
</StructureSection>
[[Category: Rhodococcus sp. rha1]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Rhodococcus jostii RHA1]]
[[Category: Unknown function]]
[[Category: Chang C]]
[[Category: Edwards AM]]
[[Category: Evdokimova E]]
[[Category: Joachimiak A]]
[[Category: Kagan O]]
[[Category: Savchenko A]]

Latest revision as of 04:03, 21 November 2024

Crystal structure of Probable transcriptional regulatory protein RHA5900Crystal structure of Probable transcriptional regulatory protein RHA5900

Structural highlights

2ibd is a 2 chain structure with sequence from Rhodococcus jostii RHA1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2ibd, resolution 1.50Å

Drag the structure with the mouse to rotate

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OCA