2d2s: Difference between revisions

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[[Image:2d2s.png|left|200px]]


{{STRUCTURE_2d2s|  PDB=2d2s  |  SCENE=  }}
==Crystal Structure of the Exo84p C-terminal Domains==
 
<StructureSection load='2d2s' size='340' side='right'caption='[[2d2s]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
===Crystal Structure of the Exo84p C-terminal Domains===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2d2s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D2S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D2S FirstGlance]. <br>
{{ABSTRACT_PUBMED_16249794}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85&#8491;</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d2s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d2s OCA], [https://pdbe.org/2d2s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d2s RCSB], [https://www.ebi.ac.uk/pdbsum/2d2s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d2s ProSAT]</span></td></tr>
==About this Structure==
</table>
[[2d2s]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D2S OCA].  
== Function ==
 
[https://www.uniprot.org/uniprot/EXO84_YEAST EXO84_YEAST] Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Plays a role in both the assembly of the exocyst and the polarization of this complex to specific sites of the plasma membrane for exocytosis and to the budding site. Also involved in assembly of the spliceosome.<ref>PMID:10438536</ref> <ref>PMID:11425851</ref> <ref>PMID:15788396</ref>
==Reference==
== Evolutionary Conservation ==
<ref group="xtra">PMID:016249794</ref><references group="xtra"/>
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d2/2d2s_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d2s ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Dong, G.]]
[[Category: Dong G]]
[[Category: Fu, C.]]
[[Category: Fu C]]
[[Category: Hutagalung, A H.]]
[[Category: Hutagalung AH]]
[[Category: Novick, P.]]
[[Category: Novick P]]
[[Category: Reinisch, K M.]]
[[Category: Reinisch KM]]
[[Category: Endocytosis-exocytosis complex]]
[[Category: Exo84p]]
[[Category: Exocyst]]
[[Category: Tethering complex]]

Latest revision as of 16:45, 13 March 2024

Crystal Structure of the Exo84p C-terminal DomainsCrystal Structure of the Exo84p C-terminal Domains

Structural highlights

2d2s is a 1 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.85Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

EXO84_YEAST Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Plays a role in both the assembly of the exocyst and the polarization of this complex to specific sites of the plasma membrane for exocytosis and to the budding site. Also involved in assembly of the spliceosome.[1] [2] [3]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

  1. ↑ Guo W, Grant A, Novick P. Exo84p is an exocyst protein essential for secretion. J Biol Chem. 1999 Aug 13;274(33):23558-64. PMID:10438536
  2. ↑ Awasthi S, Palmer R, Castro M, Mobarak CD, Ruby SW. New roles for the Snp1 and Exo84 proteins in yeast pre-mRNA splicing. J Biol Chem. 2001 Aug 17;276(33):31004-15. Epub 2001 Jun 25. PMID:11425851 doi:http://dx.doi.org/10.1074/jbc.M100022200
  3. ↑ Zhang X, Zajac A, Zhang J, Wang P, Li M, Murray J, TerBush D, Guo W. The critical role of Exo84p in the organization and polarized localization of the exocyst complex. J Biol Chem. 2005 May 27;280(21):20356-64. Epub 2005 Mar 23. PMID:15788396 doi:http://dx.doi.org/M500511200

2d2s, resolution 2.85Å

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