2be3: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2be3.png|left|200px]]


{{STRUCTURE_2be3|  PDB=2be3  |  SCENE=  }}
==Structure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniae==
 
<StructureSection load='2be3' size='340' side='right'caption='[[2be3]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
===Structure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniae===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2be3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BE3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BE3 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
[[2be3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tigr4 Streptococcus pneumoniae tigr4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BE3 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2be3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2be3 OCA], [https://pdbe.org/2be3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2be3 RCSB], [https://www.ebi.ac.uk/pdbsum/2be3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2be3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2be3 TOPSAN]</span></td></tr>
[[Category: GTP diphosphokinase]]
</table>
[[Category: Streptococcus pneumoniae tigr4]]
== Function ==
[[Category: Cuff, M E.]]
[https://www.uniprot.org/uniprot/A0A0H2UPY1_STRPN A0A0H2UPY1_STRPN]  
[[Category: Hatzos, C.]]
== Evolutionary Conservation ==
[[Category: Joachimiak, A.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
Check<jmol>
[[Category: Gtp]]
  <jmolCheckbox>
[[Category: Mcsg]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/be/2be3_consurf.spt"</scriptWhenChecked>
[[Category: Midwest center for structural genomic]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Protein structure initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Psi]]
  </jmolCheckbox>
[[Category: Pyrophosphokinase]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2be3 ConSurf].
[[Category: Streptococcus pneumoniae]]
<div style="clear:both"></div>
[[Category: Structural genomic]]
__TOC__
[[Category: Transferase]]
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus pneumoniae TIGR4]]
[[Category: Cuff ME]]
[[Category: Hatzos C]]
[[Category: Joachimiak A]]

Latest revision as of 10:53, 30 October 2024

Structure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniaeStructure of a GTP Pyrophosphokinase Family Protein from Streptococcus pneumoniae

Structural highlights

2be3 is a 2 chain structure with sequence from Streptococcus pneumoniae TIGR4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A0A0H2UPY1_STRPN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2be3, resolution 2.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA