2e6u: Difference between revisions

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-[[Image:2e6u.png|left|200px]]
-{{STRUCTURE_2e6u|  PDB=2e6u  |  SCENE=  }}
+==Crystal structure of hypothetical protein PH1109 from Pyrococcus horikoshii==
+<StructureSection load='2e6u' size='340' side='right'caption='[[2e6u]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-===Crystal structure of hypothetical protein PH1109 from Pyrococcus horikoshii===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2e6u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2czz 2czz]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E6U FirstGlance]. <br>
-{{ABSTRACT_PUBMED_16041065}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=COA:COENZYME+A'>COA</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e6u OCA], [https://pdbe.org/2e6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e6u RCSB], [https://www.ebi.ac.uk/pdbsum/2e6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e6u ProSAT]</span></td></tr>
-[[2e6u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii_ot3 Pyrococcus horikoshii ot3]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2czz 2czz]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E6U OCA].
+</table>
+== Function ==
-==Reference==
+[https://www.uniprot.org/uniprot/O58836_PYRHO O58836_PYRHO]
-<ref group="xtra">PMID:016041065</ref><ref group="xtra">PMID:017342453</ref><references group="xtra"/>
+== Evolutionary Conservation ==
-[[Category: Pyrococcus horikoshii ot3]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Kitago, Y.]]
+Check<jmol>
-[[Category: Min, Y.]]
+  <jmolCheckbox>
-[[Category: Tanaka, I.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e6/2e6u_consurf.spt"</scriptWhenChecked>
-[[Category: Watanabe, N.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Coa binding]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Rossmann-like]]
+  </jmolCheckbox>
-[[Category: Structural genomic]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e6u ConSurf].
-[[Category: Structural genomics consortium for research on gene expression system]]
+<div style="clear:both"></div>
-[[Category: Unknown function]]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Pyrococcus horikoshii OT3]]
+[[Category: Kitago Y]]
+[[Category: Min Y]]
+[[Category: Tanaka I]]
+[[Category: Watanabe N]]