1zgh: Difference between revisions

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[[Image:1zgh.png|left|200px]]


{{STRUCTURE_1zgh|  PDB=1zgh  |  SCENE=  }}
==Methionyl-tRNA formyltransferase from Clostridium thermocellum==
 
<StructureSection load='1zgh' size='340' side='right'caption='[[1zgh]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
===Methionyl-tRNA formyltransferase from Clostridium thermocellum===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1zgh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus_ATCC_27405 Acetivibrio thermocellus ATCC 27405]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1xg9 1xg9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZGH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZGH FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
[[1zgh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1xg9 1xg9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZGH OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zgh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zgh OCA], [https://pdbe.org/1zgh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zgh RCSB], [https://www.ebi.ac.uk/pdbsum/1zgh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zgh ProSAT], [https://www.topsan.org/Proteins/SECSG/1zgh TOPSAN]</span></td></tr>
[[Category: Clostridium thermocellum]]
</table>
[[Category: Chang, J.]]
== Function ==
[[Category: Chang, S.]]
[https://www.uniprot.org/uniprot/A3DHJ7_ACET2 A3DHJ7_ACET2]  
[[Category: Chen, L.]]
== Evolutionary Conservation ==
[[Category: Habel, J.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: III, W B.Arendall.]]
Check<jmol>
[[Category: Kataeva, I.]]
  <jmolCheckbox>
[[Category: Lee, D.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zg/1zgh_consurf.spt"</scriptWhenChecked>
[[Category: Lin, D.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Liu, Z.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Richardson, D C.]]
  </jmolCheckbox>
[[Category: Richardson, J S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zgh ConSurf].
[[Category: Rose, J P.]]
<div style="clear:both"></div>
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
__TOC__
[[Category: Tempel, W.]]
</StructureSection>
[[Category: Wang, B.]]
[[Category: Acetivibrio thermocellus ATCC 27405]]
[[Category: Xu, H.]]
[[Category: Large Structures]]
[[Category: Yang, H.]]
[[Category: Arendall III WB]]
[[Category: Zhao, M.]]
[[Category: Chang J]]
[[Category: Zhou, W.]]
[[Category: Chang S]]
[[Category: Clostridium thermocellum]]
[[Category: Chen L]]
[[Category: Methionyl-trna formyltransferase]]
[[Category: Habel J]]
[[Category: Protein structure initiative]]
[[Category: Kataeva I]]
[[Category: Psi]]
[[Category: Lee D]]
[[Category: Secsg]]
[[Category: Lin D]]
[[Category: Southeast collaboratory for structural genomic]]
[[Category: Liu Z]]
[[Category: Transferase]]
[[Category: Richardson DC]]
[[Category: Richardson JS]]
[[Category: Rose JP]]
[[Category: Tempel W]]
[[Category: Wang B]]
[[Category: Xu H]]
[[Category: Yang H]]
[[Category: Zhao M]]
[[Category: Zhou W]]

Latest revision as of 11:11, 15 May 2024

Methionyl-tRNA formyltransferase from Clostridium thermocellumMethionyl-tRNA formyltransferase from Clostridium thermocellum

Structural highlights

1zgh is a 1 chain structure with sequence from Acetivibrio thermocellus ATCC 27405. This structure supersedes the now removed PDB entry 1xg9. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A3DHJ7_ACET2

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1zgh, resolution 2.05Å

Drag the structure with the mouse to rotate

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OCA
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